RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 LIN52Q52LA3 116 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ZNF311Q5JNZ3 666 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PRAMEF17Q5VTA0 474 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TTC23Q5W5X9 447 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 KDM4DQ6B0I6 523 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TYW3Q6IPR3 259 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 DGAT2L6Q6ZPD8 337 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 WDR53Q7Z5U6 358 aaPredicted RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 TSEN54Q7Z6J9 526 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 HS3ST5Q8IZT8 346 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ZNF619Q8N2I2 560 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PHF10Q8WUB8 498 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 BATF3Q9NR55 127 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 PNPLA3Q9NST1 481 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 ERVK-19Q9WJR5 959 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 TESMINQ9Y4I5 508 aa8.03□□□□□ -1.12
TPM3-213ENST00000368545 MAGED1Q9Y5V3 778 aaPredicted RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 COL27A1Q8IZC6 1860 aaPredicted RBP8.03□□□□□ -1.12
TPM3-213ENST00000368545 C17orf105B2RV13 164 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 JRKO75564 520 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ONECUT2O95948 504 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 KNG1P01042 644 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 LYNP07948 512 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 CYC1P08574 325 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ANXA8P13928 327 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 TNNI3P19429 210 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 RPS4Y1P22090 263 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 RPS6KA3P51812 740 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PGDP52209 483 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 CDH12P55289 794 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 DCDP81605 110 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 PSG6Q00889 435 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OCA2Q04671 838 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 KLRB1Q12918 225 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PPP1R8Q12972 351 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 DUSP8Q13202 625 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 C1orf189Q5VU69 101 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 UGT2A3Q6UWM9 527 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 TAGAPQ8N103 731 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ZNF555Q8NEP9 628 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OR4C15Q8NGM1 316 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OR52P1PQ8NH57 321 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 DAZLQ92904 295 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 FBXL20Q96IG2 436 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 VSTM2LQ96N03 204 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 TINAGL1Q9GZM7 467 aaPredicted RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 NELFAQ9H3P2 528 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PRDM13Q9H4Q3 707 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ARMC7Q9H6L4 198 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 GPR35Q9HC97 309 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 Q9N2J8 555 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ENOPH1Q9UHY7 261 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ZNF443Q9Y2A4 671 aaPredicted RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 LOC102723971A0A1B0GUV8 181 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 AGAP5A6NIR3 686 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 EFCAB7A8K855 629 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 UGT2B17O75795 530 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OXSR1O95747 527 aaPredicted RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 DBIP07108 87 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 ITGAMP11215 1152 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 IL7RP16871 459 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 SSTR4P31391 388 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 CCKBRP32239 447 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 IFNA8P32881 189 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 GABRA3P34903 492 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 LIMS1P48059 325 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ADARB1P78563 741 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 MICAQ29983 383 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 NKAIN1Q4KMZ8 207 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PWWP2BQ6NUJ5 590 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 TCTN3Q6NUS6 607 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 FAHD1Q6P587 224 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 DEF8Q6ZN54 512 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 USP51Q70EK9 711 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 COX15Q7KZN9 410 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 LINC00471Q8N535 108 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 NKAIN3Q8N8D7 197 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PLPP5Q8NEB5 264 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OR10G2Q8NGC3 310 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OR14A16Q8NHC5 309 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 C16orf52Q8NHV5 167 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 VANGL1Q8TAA9 524 aaPredicted RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 GIPC3Q8TF64 312 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 OIT3Q8WWZ8 545 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PIK3R3Q92569 461 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PRRC1Q96M27 445 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 ARHGDIGQ99819 225 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 VN1R1Q9GZP7 353 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 TOR3AQ9H497 397 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 PNO1Q9NRX1 252 aaKnown RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 JKAMPQ9P055 326 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 AKAP7Q9P0M2 348 aaPredicted RBP8.02□□□□□ -1.13
TPM3-213ENST00000368545 MKLN1Q9UL63 735 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 CLCA3PQ9Y6N3 262 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 SEC16AO15027 2179 aa8.02□□□□□ -1.13
TPM3-213ENST00000368545 DMDP11532 3685 aa8.01□□□□□ -1.13
TPM3-213ENST00000368545 DSPP15924 2871 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms