RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 CNIH4Q9P003 139 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 IL20RAQ9UHF4 553 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 DIMT1Q9UNQ2 313 aaKnown RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 HNRNPCL2B2RXH8 293 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 LRRTM2O43300 516 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 MAN2A2P49641 1150 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 EFNA3P52797 238 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 TEKQ02763 1124 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 AANATQ16613 207 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ZNF628Q5EBL2 1059 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 PDZK1Q5T2W1 519 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 OR2G6Q5TZ20 316 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ZNF730Q6ZMV8 503 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 PRR22Q8IZ63 422 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 COX18Q8N8Q8 333 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 GATSQ8NAP1 163 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 SLC38A9Q8NBW4 561 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 TEX47Q8TBZ9 253 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 GATAD2BQ8WXI9 593 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 DNAJA3Q96EY1 480 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 SPATA5L1Q9BVQ7 753 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 ACTRT3Q9BYD9 372 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 OR8D2Q9GZM6 311 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 TWSG1Q9GZX9 223 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 SLC38A1Q9H2H9 487 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 AKIRIN1Q9H9L7 192 aaPredicted RBP9.83□□□□□ -0.84
TPM3-212ENST00000368533 LIN7BQ9HAP6 207 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 RXFP3Q9NSD7 469 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 CTSFQ9UBX1 484 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 A3GALT2U3KPV4 340 aa9.83□□□□□ -0.84
TPM3-212ENST00000368533 LY6G6EA0A0G2JKS1 128 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SRPX2O60687 465 aaPredicted RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 HBQ1P09105 142 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 AKR1D1P51857 326 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 CAV3P56539 151 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SNRPGP62308 76 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 DUSP8Q13202 625 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 NCF4Q15080 339 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 MAPK14Q16539 360 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 NDUFA9Q16795 377 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 PRICKLE4Q2TBC4 344 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 CHMP1BQ7LBR1 199 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 TCTE3Q8IZS6 198 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 RDH10Q8IZV5 341 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 LINC00518Q8N0U6 118 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 C9orf62Q8N4C0 152 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ARHGEF39Q8N4T4 335 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 DIRAS2Q96HU8 199 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 MS4A4EQ96PG1 132 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 LYRM4Q9HD34 91 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SEC14L4Q9UDX3 406 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 A4GNTQ9UNA3 340 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 YARS2Q9Y2Z4 477 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 WDR45Q9Y484 360 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 U3KQA8 63 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 GNB5O14775 395 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SIGLEC5O15389 551 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 PPM1BO75688 479 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ALPPP05187 535 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SYPP08247 313 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 NUBP1P53384 320 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 PER3P56645 1201 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 NDUFAF6Q330K2 333 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 CRTC2Q53ET0 693 aaPredicted RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 ARHGAP40Q5TG30 622 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 MEDAGQ5VYS4 303 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 BHLHB9Q6PI77 547 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 TEX261Q6UWH6 196 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 LHFPL3Q86UP9 236 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 THAP3Q8WTV1 239 aaPredicted RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 ST8SIA4Q92187 359 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 GAL3ST4Q96RP7 486 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 DCLRE1CQ96SD1 692 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 DIABLOQ9NR28 239 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 U3KQ87 197 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ALPK2Q86TB3 2170 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ARRDC5A6NEK1 342 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 FABP12A6NFH5 140 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 PLOD3O60568 738 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 CBX7O95931 251 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 HRGP04196 525 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 PRG2P13727 222 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 APEX1P27695 318 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 ETV6P41212 452 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 RPL35P42766 123 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 CBX5P45973 191 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ANXA11P50995 505 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 MRPL28Q13084 256 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 HNRNPA0Q13151 305 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 MLC1Q15049 377 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 ANGPT1Q15389 498 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SLC35F1Q5T1Q4 408 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 CEP76Q8TAP6 659 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 SETD6Q8TBK2 473 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 APOBEC4Q8WW27 367 aaKnown RBP9.82□□□□□ -0.84
TPM3-212ENST00000368533 UPRTQ96BW1 309 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 RADILQ96JH8 1075 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 DGAT2Q96PD7 388 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 GPA33Q99795 319 aa9.82□□□□□ -0.84
TPM3-212ENST00000368533 NDC1Q9BTX1 674 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms