RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 OR11A1Q9GZK7 315 aa16.86■□□□□ 0.29
CKS1B-203ENST00000368439 ADAM19Q9H013 955 aa16.86■□□□□ 0.29
CKS1B-203ENST00000368439 RABEP2Q9H5N1 569 aa16.86■□□□□ 0.29
CKS1B-203ENST00000368439 C12orf49Q9H741 205 aa16.86■□□□□ 0.29
CKS1B-203ENST00000368439 PLEKHF2Q9H8W4 249 aa16.86■□□□□ 0.29
CKS1B-203ENST00000368439 TMED7-TICAM2A0A0A6YYA0 188 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 YES1P07947 543 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 GKN3PP0CG01 181 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 GPX2P18283 190 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 NCF2P19878 526 aaPredicted RBP16.85■□□□□ 0.29
CKS1B-203ENST00000368439 TACR3P29371 465 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 SLC1A3P43003 542 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 HTR3AP46098 478 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 CLK1P49759 484 aaKnown RBP16.85■□□□□ 0.29
CKS1B-203ENST00000368439 TMEM201Q5SNT2 666 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 BEND4Q6ZU67 534 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 ZNF440Q8IYI8 595 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 SPATA9Q9BWV2 254 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 ST6GALNAC2Q9UJ37 374 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 TMED7Q9Y3B3 224 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 HDGFL3Q9Y3E1 203 aa16.85■□□□□ 0.29
CKS1B-203ENST00000368439 SPIN1Q9Y657 262 aaPredicted RBP16.85■□□□□ 0.29
CKS1B-203ENST00000368439 A0A0G2JND7 137 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 TMEM72A0PK05 275 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 DEFB108AA8MXU0 73 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 SULT2B1O00204 365 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 ZNF208O43345 1280 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 GCM2O75603 506 aaPredicted RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 PGM3O95394 542 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 PMS2P2O95744 297 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 THBDP07204 575 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 FESP07332 822 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 ARAFP10398 606 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 PRG2P13727 222 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 CRYGSP22914 178 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 FKBP2P26885 142 aaKnown RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 POLR2HP52434 150 aaKnown RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 IST1P53990 364 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 CSNK2A1P68400 391 aaPredicted RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 POU4F3Q15319 338 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 ANKRD34AQ69YU3 496 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 ABLIM2Q6H8Q1 611 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 CGB2Q6NT52 195 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 MTDHQ86UE4 582 aaKnown RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 RETREG3Q86VR2 466 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 GABRG1Q8N1C3 465 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 BBS10Q8TAM1 723 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 NINJ1Q92982 152 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 ZNF300Q96RE9 604 aaPredicted RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 TACO1Q9BSH4 297 aaKnown RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 KLHL4Q9C0H6 718 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 C6orf203Q9P0P8 240 aaPredicted RBP16.84■□□□□ 0.29
CKS1B-203ENST00000368439 KLHL9Q9P2J3 617 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 PRDM4Q9UKN5 801 aa16.84■□□□□ 0.29
CKS1B-203ENST00000368439 HIVEP1P15822 2718 aa16.83■□□□□ 0.29
CKS1B-203ENST00000368439 TMEM247A6NEH6 219 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF724A8MTY0 619 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF814B7Z6K7 855 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 CASKO14936 926 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 F8P00451 2351 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 TFPIP10646 304 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 CCNA2P20248 432 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 PPIBP23284 216 aaKnown RBP16.83■□□□□ 0.28
CKS1B-203ENST00000368439 EDNRAP25101 427 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 LOXP28300 417 aaPredicted RBP16.83■□□□□ 0.28
CKS1B-203ENST00000368439 RASGEF1BQ0VAM2 473 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 LARS2Q15031 903 aaKnown RBP16.83■□□□□ 0.28
CKS1B-203ENST00000368439 ADRM1Q16186 407 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 ZSWIM7Q19AV6 140 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 RUNDC3AQ59EK9 446 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 METTL21CQ5VZV1 264 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 STK32CQ86UX6 486 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 DPP10Q8N608 796 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 DNAJA3Q96EY1 480 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 CPPED1Q9BRF8 314 aaPredicted RBP16.83■□□□□ 0.28
CKS1B-203ENST00000368439 MED18Q9BUE0 208 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 TMEM120AQ9BXJ8 343 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 LEF1Q9UJU2 399 aaPredicted RBP16.83■□□□□ 0.28
CKS1B-203ENST00000368439 TRIM33Q9UPN9 1127 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 TRAPPC4Q9Y296 219 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 IFT52Q9Y366 437 aa16.83■□□□□ 0.28
CKS1B-203ENST00000368439 RAI1Q7Z5J4 1906 aaPredicted RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 IGKV3D-15A0A087WSY6 115 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 UQCRHLA0A096LP55 91 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ZC3H12DA2A288 527 aaKnown RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF716A6NP11 495 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 DNPH1O43598 174 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 IMPDH2P12268 514 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ETS2P15036 469 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 PSMB1P20618 241 aaKnown RBP16.82■□□□□ 0.28
CKS1B-203ENST00000368439 MAP2K6P52564 334 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 H3F3AP84243 136 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 PDK3Q15120 406 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 ZNF311Q5JNZ3 666 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 GCNT6Q5T4J0 391 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 PAMR1Q6UXH9 720 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 SPNS3Q6ZMD2 512 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 SERPINA11Q86U17 422 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 NFKBIDQ8NI38 313 aa16.82■□□□□ 0.28
CKS1B-203ENST00000368439 TSPEARQ8WU66 669 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms