RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PRSS42Q7Z5A4 293 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 GATAD2AQ86YP4 633 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 D2HGDHQ8N465 521 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SIRT6Q8N6T7 355 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 POMGNT2Q8NAT1 580 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SPRYD4Q8WW59 207 aaPredicted RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 TMEM203Q969S6 136 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 NACC2Q96BF6 587 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 TRMT61AQ96FX7 289 aaKnown RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 TEAD3Q99594 435 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 NDC1Q9BTX1 674 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 ALG8Q9BVK2 526 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 SPRTNQ9H040 489 aaPredicted RBP12.88□□□□□ -0.35
USF1-202ENST00000368020 LANCL2Q9NS86 450 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 TOR4AQ9NXH8 423 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 BABAM2Q9NXR7 383 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 DTX4Q9Y2E6 619 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 ZNF337Q9Y3M9 751 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 CLCA3PQ9Y6N3 262 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 RNF215Q9Y6U7 377 aa12.88□□□□□ -0.35
USF1-202ENST00000368020 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 TRAV27A0A087WT01 109 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 HRKO00198 91 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 SCDO00767 359 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 CER1O95813 267 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 CELP19835 753 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 PTBP1P26599 531 aaKnown RBP eCLIP12.87□□□□□ -0.35
USF1-202ENST00000368020 PPP3R1P63098 170 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 HNRNPA0Q13151 305 aaKnown RBP12.87□□□□□ -0.35
USF1-202ENST00000368020 ERV3-1Q14264 604 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 SHBQ15464 509 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 ELAVL1Q15717 326 aaKnown RBP12.87□□□□□ -0.35
USF1-202ENST00000368020 LPAL2Q16609 132 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 MZT2AQ6P582 158 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 WDR74Q6RFH5 385 aaPredicted RBP12.87□□□□□ -0.35
USF1-202ENST00000368020 KIRREL2Q6UWL6 708 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 THSD4Q6ZMP0 1018 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 DPY19L2P2Q6ZN68 376 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 SHISA5Q8N114 240 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 ARIH2OSQ8N7S6 290 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 SENP5Q96HI0 755 aaPredicted RBP12.87□□□□□ -0.35
USF1-202ENST00000368020 TMEM43Q9BTV4 400 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 C12orf10Q9HB07 376 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 MCCC2Q9HCC0 563 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 ADAM30Q9UKF2 790 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 NOX1Q9Y5S8 564 aa12.87□□□□□ -0.35
USF1-202ENST00000368020 VPS13AQ96RL7 3174 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 IGKV3D-11A0A0A0MRZ8 115 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 FAM183AA6NL82 134 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 H3BMH7 237 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 CASKO14936 926 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 TOX3O15405 576 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 RGS9O75916 674 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 SPTBP11277 2137 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 UBL4AP11441 157 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SLC2A5P22732 501 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 EPHA8P29322 1005 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 SLC6A8P48029 635 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SLC37A1P57057 533 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 ACTA2P62736 377 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 ACTG2P63267 376 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 FABP5Q01469 135 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SLC35F1Q5T1Q4 408 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 XKRXQ6PP77 449 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 METAP1DQ6UB28 335 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 TTLL10Q6ZVT0 673 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SNX29P2Q8IUI4 249 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 TMEM151BQ8IW70 566 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SLC25A45Q8N413 288 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 GDPD1Q8N9F7 314 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 FAM181AQ8N9Y4 354 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 SUMF1Q8NBK3 374 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 OR51A7Q8NH64 312 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 OR14A16Q8NHC5 309 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 NEIL3Q8TAT5 605 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 ACOT12Q8WYK0 555 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 DAZLQ92904 295 aaKnown RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 KISS1RQ969F8 398 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 LCORQ96JN0 433 aaPredicted RBP12.86□□□□□ -0.35
USF1-202ENST00000368020 NEURL2Q9BR09 285 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 KATNB1Q9BVA0 655 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 ARRDC1-AS1Q9H2J1 176 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 TPK1Q9H3S4 243 aa12.86□□□□□ -0.35
USF1-202ENST00000368020 CCDC182A6NF36 153 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PATE3B3GLJ2 98 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 GABRPO00591 440 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 KHNYNO15037 678 aaKnown RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 ARPC3O15145 178 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 RFPL3O75679 317 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 PPP1R3DO95685 299 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 DLGAP3O95886 979 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 CLPSP04118 112 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 SBK2P0C263 348 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 FBLP22087 321 aaKnown RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 COL9A2Q14055 689 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 ZNF791Q3KP31 576 aaPredicted RBP12.85□□□□□ -0.35
USF1-202ENST00000368020 SLC35D3Q5M8T2 416 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 KANSL1Q7Z3B3 1105 aa12.85□□□□□ -0.35
USF1-202ENST00000368020 KLBQ86Z14 1044 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms