RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 ARSKQ6UWY0 536 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CXXC5Q7LFL8 322 aaKnown RBP13.59□□□□□ -0.23
PRKN-204ENST00000366896 CPOQ8IVL8 374 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 SLC16A11Q8NCK7 471 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 OR2T4Q8NH00 348 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 GIMAP1Q8WWP7 306 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CDS1Q92903 461 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 YIPF5Q969M3 257 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 GAL3ST3Q96A11 431 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 SAMD8Q96LT4 415 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 IER2Q9BTL4 223 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 RBCK1Q9BYM8 510 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 CACYBPQ9HB71 228 aaKnown RBP13.59□□□□□ -0.23
PRKN-204ENST00000366896 TMEM5Q9Y2B1 443 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 SLC17A4Q9Y2C5 497 aa13.59□□□□□ -0.23
PRKN-204ENST00000366896 SIRT4Q9Y6E7 314 aaPredicted RBP13.59□□□□□ -0.23
PRKN-204ENST00000366896 A0A1W2PQU0 124 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 M0R233 179 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 PPM1BO75688 479 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 APBB3O95704 486 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 H2AFB2P0C5Z0 115 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 ACSM4P0C7M7 580 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 SHC1P29353 583 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 GCGRP47871 477 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 EPHA4P54764 986 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 ZP1P60852 638 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 RPS21P63220 83 aaKnown RBP13.58□□□□□ -0.23
PRKN-204ENST00000366896 TCEA2Q15560 299 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 NIPAL3Q6P499 406 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 TPRA1Q86W33 373 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 SIAH3Q8IW03 269 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 OR7G2Q8NG99 324 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 OR51G2Q8NGK0 314 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 ART5Q96L15 291 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 CDCP1Q9H5V8 836 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 KIR3DX1Q9H7L2 352 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 MED20Q9H944 212 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 SLC7A7Q9UM01 511 aa13.58□□□□□ -0.23
PRKN-204ENST00000366896 MDC1Q14676 2089 aaKnown RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3DA0A087WVF3 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3IA0A087WXS9 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3EA0A087X179 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 hCG_1807616A0A1W2PRN6 198 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3LB9A6J9 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 FZD7O75084 574 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3HP0C7X1 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 PAICSP22234 425 aaKnown RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 ATP6V1E1P36543 226 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 BTN3A2P78410 334 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3CQ6IPX1 549 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 BTN2A1Q7KYR7 527 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 MEPCEQ7L2J0 689 aaKnown RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 TBC1D3Q8IZP1 549 aaPredicted RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 OR2L13Q8N349 312 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 UXS1Q8NBZ7 420 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 KCT2Q8NC54 265 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 ZBTB44Q8NCP5 570 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 BEST4Q8NFU0 473 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 PMEPA1Q969W9 287 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 ERMAPQ96PL5 475 aaPredicted RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 REG4Q9BYZ8 158 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 TMEM168Q9H0V1 697 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 ZNF223Q9UK11 482 aaPredicted RBP13.58□□□□□ -0.24
PRKN-204ENST00000366896 HEBP2Q9Y5Z4 205 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 KCNMB2Q9Y691 235 aa13.58□□□□□ -0.24
PRKN-204ENST00000366896 NCOR1O75376 2440 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 FMO6PO60774 539 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 CD3GP09693 182 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 ZGLP1P0C6A0 271 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 ICAM2P13598 275 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 CCR6P51684 374 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 ZNF136P52737 540 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 PPP2CBP62714 309 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 PPP2CAP67775 309 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 EEF1A1P68104 462 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 ZNF836Q6ZNA1 936 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 CMIPQ8IY22 773 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 LRRC25Q8N386 305 aaPredicted RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 LNX2Q8N448 690 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 OR2T35Q8NGX2 323 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TRMT10AQ8TBZ6 339 aaKnown RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 NT5CQ8TCD5 201 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 DOK4Q8TEW6 326 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TBX5Q99593 518 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TIMP4Q99727 224 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TPSD1Q9BZJ3 242 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 ZNF436Q9C0F3 470 aaPredicted RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 TRIM36Q9NQ86 728 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 CYP8B1Q9UNU6 501 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 DNAH14Q0VDD8 3507 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 A0A0G2JK05 382 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TRAPPC13A5PLN9 417 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 C10orf142B7Z368 130 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 ZNF593O00488 134 aaPredicted RBP13.57□□□□□ -0.24
PRKN-204ENST00000366896 BHLHE40O14503 412 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 SSNA1O43805 119 aa13.57□□□□□ -0.24
PRKN-204ENST00000366896 TPPPO94811 219 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms