RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 CNOT4O95628 575 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 FESP07332 822 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TFPTP0C1Z6 253 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HOXB4P17483 251 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RYKP34925 604 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IDH2P48735 452 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MRPL19P49406 292 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TAB1Q15750 504 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MSANTD1Q6ZTZ1 278 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 WFDC8Q8IUA0 241 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF611Q8N823 705 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HSD17B8Q92506 261 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 C18orf12Q96KH6 178 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZBTB18Q99592 522 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 USB1Q9BQ65 265 aaKnown RBP12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GSX2Q9BZM3 304 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ADAM19Q9H013 955 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NKIRAS1Q9NYS0 192 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OSGIN1Q9UJX0 560 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PRDM4Q9UKN5 801 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TRAPPC4Q9Y296 219 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HDGFL3Q9Y3E1 203 aa12.11□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ARID1AO14497 2285 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CDHR4A6H8M9 788 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RFXANKO14593 260 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HS3ST1O14792 307 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ARHGEF9O43307 516 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ERLIN1O75477 346 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KRT75O95678 551 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HOXB9P17482 250 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 COX5AP20674 150 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HTR3AP46098 478 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ANXA11P50995 505 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC16A1P53985 500 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 HPCAP84074 193 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 Q5PR19 223 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 EPGNQ6UW88 154 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 BIVMQ86UB2 503 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF563Q8TA94 476 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PNPT1Q8TCS8 783 aaKnown RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 KISS1RQ969F8 398 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF775Q96BV0 537 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SMR3AQ99954 134 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR11A1Q9GZK7 315 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF701Q9NV72 531 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 CHST2Q9Y4C5 530 aa12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SPIN1Q9Y657 262 aaPredicted RBP12.1□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMED7-TICAM2A0A0A6YYA0 188 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 UBDO15205 165 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ZNF208O43345 1280 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 RAMP1O60894 148 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMCC2O75069 709 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 PGM3O95394 542 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DBIP07108 87 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ETFAP13804 333 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IGHV1-2P23083 117 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 IL32P24001 234 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ACAA2P42765 397 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC1A3P43003 542 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 POLR2JP52435 117 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MAP2K6P52564 334 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 EPS8Q12929 822 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GTDC1Q4AE62 458 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 MRPL2Q5T653 305 aaKnown RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 AGBL2Q5U5Z8 902 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 NXNQ6DKJ4 435 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 DNAJC14Q6Y2X3 702 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GALNT5Q7Z7M9 940 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 ATG4DQ86TL0 474 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 LSRQ86X29 649 aaPredicted RBP12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 OR9I1Q8NGQ6 314 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 SLC38A5Q8WUX1 472 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 WDR60Q8WVS4 1066 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 GTF2H4Q92759 462 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 VPS33AQ96AX1 596 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 C7orf26Q96N11 449 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 POTEKPQ9BYX7 375 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TPT1P8Q9HAU6 139 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMED7Q9Y3B3 224 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 USH1CQ9Y6N9 552 aa12.09□□□□□ -0.47
TNFRSF1A-202ENST00000366159 TMEM72A0PK05 275 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 DPRXA6NFQ7 191 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 LYZL6O75951 148 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 INHBBP09529 407 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 DANCRP0C864 163 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 NR2F1P10589 423 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TFPIP10646 304 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 IMPDH2P12268 514 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 IL7RP16871 459 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 TACR3P29371 465 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 PTH2RP49190 550 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 POLR2HP52434 150 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 BHLHA15Q7RTS1 189 aaPredicted RBP12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 P3H2Q8IVL5 708 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CCDC103Q8IW40 242 aa12.08□□□□□ -0.48
TNFRSF1A-202ENST00000366159 CIARTQ8N365 385 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms