RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 CAMKVQ8NCB2 501 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 BRIX1Q8TDN6 353 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 CNOT9Q92600 299 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ATOH1Q92858 354 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 SORBS1Q9BX66 1292 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 MS4A8Q9BY19 250 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 CHIAQ9BZP6 476 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 MS4A7Q9GZW8 240 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 CTPS2Q9NRF8 586 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 SLC39A1Q9NY26 324 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 PLXND1Q9Y4D7 1925 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 A0A1W2PP55 124 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 GSAPA4D1B5 854 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 DNASE2O00115 360 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 SDC3O75056 442 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ATP1B1P05026 303 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 GCGRP47871 477 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 MAZP56270 477 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ACTC1P68032 377 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ACTA1P68133 377 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 TSTA3Q13630 321 aaPredicted RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ACSM3Q53FZ2 586 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ADAMTSL4Q6UY14 1074 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 TMUB2Q71RG4 321 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 OVCH1Q7RTY7 1134 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 FAM129CQ86XR2 697 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 OR5D16Q8NGK9 328 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 OR5M9Q8NGP3 310 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 OR1S1Q8NH92 325 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 EXOSC8Q96B26 276 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 PGLYRP3Q96LB9 341 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 MCCC2Q9HCC0 563 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 SLC2A4RGQ9NR83 387 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 SEMA4GQ9NTN9 838 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 ZCCHC3Q9NUD5 404 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 KLHL28Q9NXS3 571 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 NKIRAS2Q9NYR9 191 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 KLHL9Q9P2J3 617 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 CYB5R1Q9UHQ9 305 aa17.62■□□□□ 0.41
CMTM3-201ENST00000361909 MRPS7Q9Y2R9 242 aaKnown RBP17.62■□□□□ 0.41
CMTM3-201ENST00000361909 TRIOBPQ9H2D6 2365 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 ZNF98A6NK75 572 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 PCP4L1A6NKN8 68 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 K7ESM1 405 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 VEGFDO43915 354 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 PCDH8O95206 1070 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 OR5F1O95221 314 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 ATF1P18846 271 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 TEAD1P28347 426 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 ZNF658BQ4V348 819 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-201ENST00000361909 RNASE12Q5GAN4 147 aaKnown RBP17.61■□□□□ 0.41
CMTM3-201ENST00000361909 FAM27D1Q5T7N8 215 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 DMKNQ6E0U4 476 aaPredicted RBP17.61■□□□□ 0.41
CMTM3-201ENST00000361909 GSG1LQ6UXU4 331 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 CDH26Q8IXH8 852 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 ZNF454Q8N9F8 522 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 C15orf40Q8WUR7 153 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 THAP4Q8WY91 577 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 HLA-CQ95604 372 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 SLC25A32Q9H2D1 315 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 PELI2Q9HAT8 420 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 GPR34Q9UPC5 381 aa17.61■□□□□ 0.41
CMTM3-201ENST00000361909 IGLON5A6NGN9 336 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PLRG1O43660 514 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 GMDSO60547 372 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 ATP5A1P25705 553 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 DLX5P56178 289 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 KIAA1024LP59773 190 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 MEF2AQ02078 507 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 MLLT1Q03111 559 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PABPC1L2AQ5JQF8 200 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 TMEM220Q6QAJ8 160 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 TMEM99Q8N816 258 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PHYHIPQ92561 330 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PNPLA2Q96AD5 504 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 ORAI1Q96D31 301 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 COX14Q96I36 57 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 LINC00615Q96LM1 132 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 SLC38A3Q99624 504 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 DPH7Q9BTV6 452 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 MRI1Q9BV20 369 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 C1QTNF2Q9BXJ5 285 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 SERGEFQ9UGK8 458 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 NDRG3Q9UGV2 375 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 RCE1Q9Y256 329 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PCDHGA9Q9Y5G4 932 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 ATG2BQ96BY7 2078 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 TRPM6Q9BX84 2022 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 ARPC1BO15143 372 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 GATBO75879 557 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 KRT33AO76009 404 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 SRFP11831 508 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 RPS21P63220 83 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 PRPF38BQ5VTL8 546 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 RPL13AP3Q6NVV1 102 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 FAM180BQ6P0A1 224 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 MEX3DQ86XN8 651 aaKnown RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 LILRA3Q8N6C8 439 aaPredicted RBP17.6■□□□□ 0.41
CMTM3-201ENST00000361909 OR52L1Q8NGH7 329 aa17.6■□□□□ 0.41
CMTM3-201ENST00000361909 SLC2A12Q8TD20 617 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms