RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CD163Q86VB7 1156 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 CYP4Z1Q86W10 505 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 DOLPP1Q86YN1 238 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 VANGL1Q8TAA9 524 aaPredicted RBP12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 STK35Q8TDR2 534 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 RELTQ969Z4 430 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 C7orf34Q96L11 122 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 PRRC1Q96M27 445 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 NPAS1Q99742 590 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 VKORC1Q9BQB6 163 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 AMBRA1Q9C0C7 1298 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 IL1RAPQ9NPH3 570 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 PNPLA3Q9NST1 481 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 CAMK2AQ9UQM7 478 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 POMPQ9Y244 141 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 TRAPPC4Q9Y296 219 aa12.45□□□□□ -0.42
NSMCE1-201ENST00000361439 TCRBV5S2A0A599 114 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 HTR3EA5X5Y0 456 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 CD8B2A6NJW9 211 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ELOA3DA6NLF2 546 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 H0Y3Z8 333 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 IGF2P01344 180 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 RHCEP18577 417 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ATP6V1B2P21281 511 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 SLC7A1P30825 629 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 TAS2R41P59536 307 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 RAC3P60763 192 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 CSNK2A1P68400 391 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ST3GAL3Q11203 375 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 MRPL49Q13405 166 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 CTU2Q2VPK5 515 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ELOA3BQ3SY89 546 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 TMEM176BQ3YBM2 270 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 FAM98BQ52LJ0 330 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 TMEM211Q6ICI0 200 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 LINC00114Q6XXX2 140 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 DEF8Q6ZN54 512 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 TMPPEQ6ZT21 453 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 PIWIL3Q7Z3Z3 882 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 RBM45Q8IUH3 476 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ELOA3Q8NG57 546 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 OR10Q1Q8NGQ4 319 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 OR6S1Q8NH40 331 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 OR2V1Q8NHB1 315 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 HS6ST2Q96MM7 605 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 EPYCQ99645 322 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 TMEM43Q9BTV4 400 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 SLC19A3Q9BZV2 496 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ANKRD19PQ9H560 264 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 OSGIN2Q9Y236 505 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 FAM32AQ9Y421 112 aaKnown RBP12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ZNF175Q9Y473 711 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ENPP4Q9Y6X5 453 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 MYO18BQ8IUG5 2567 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 ZGRF1Q86YA3 2104 aa12.44□□□□□ -0.42
NSMCE1-201ENST00000361439 GTF3C1Q12789 2109 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 J3QKU1 62 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 EIF1AYO14602 144 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 OR2T1O43869 369 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 NPIPB7O75200 414 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 CIB2O75838 187 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 PMS2P2O95744 297 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 FABP3P05413 133 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 GPIP06744 558 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 PLA2G2AP14555 144 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 IL11P20809 199 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 GNLYP22749 145 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 RBM34P42696 430 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 SUCLG1P53597 346 aaKnown RBP12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 CDH12P55289 794 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 CLDN15P56746 228 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 CLDN20P56880 219 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 CARD18P57730 90 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 SRYQ05066 204 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 C3AR1Q16581 482 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ZSCAN26Q16670 478 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ACSF3Q4G176 576 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 C4orf17Q53FE4 359 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 C1orf185Q5T7R7 199 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 NSUN5P2Q63ZY6 315 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 HBMQ6B0K9 141 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ZNF585AQ6P3V2 769 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 B3GNT6Q6ZMB0 384 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 OFCC1Q8IZS5 231 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 OR5M9Q8NGP3 310 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 SLC41A3Q96GZ6 507 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ZNF300Q96RE9 604 aaPredicted RBP12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ZNF426Q9BUY5 554 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 NDUFAF4Q9P032 175 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 TNFRSF10DQ9UBN6 386 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 RIMS3Q9UJD0 308 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 A4GNTQ9UNA3 340 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 ESPL1Q14674 2120 aa12.43□□□□□ -0.42
NSMCE1-201ENST00000361439 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
NSMCE1-201ENST00000361439 A0A0J9YW62 118 aa12.42□□□□□ -0.42
NSMCE1-201ENST00000361439 TCRBV3S1A0A5B6 114 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms