RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FGF7P21781 194 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 HOXA10P31260 410 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 WNT7BP56706 349 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 TAS2R46P59540 309 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SYT14P1Q58G82 188 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 LRRC73Q5JTD7 316 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 BPIFB2Q8N4F0 458 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 OR5M8Q8NGP6 311 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF514Q96K75 400 aaPredicted RBP5.7□□□□□ -1.5
VPS13B-203ENST00000358544 SRMSQ9H3Y6 488 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 KCNS2Q9ULS6 477 aa5.7□□□□□ -1.5
VPS13B-203ENST00000358544 A0A0U1RQK1 487 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MEIS3P2A8K0S8 358 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CLDN4O14493 209 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 DPEP1P16444 411 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MRPL19P49406 292 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 B3GLCTQ6Y288 498 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 FRZBQ92765 325 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 C4orf36Q96KX1 117 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CSF3RQ99062 836 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ORAI3Q9BRQ5 295 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MS4A7Q9GZW8 240 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 KCNK12Q9HB15 430 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 C2orf78A6NCI8 922 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MEIS3P1A6NDR6 274 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 OR2C1O95371 312 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EPHX1P07099 455 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CD9P21926 228 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ID2Q02363 134 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PDE7AQ13946 482 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CLINT1Q14677 625 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 RELTQ969Z4 430 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF587Q96SQ5 575 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 C20orf24Q9BUV8 137 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EXOSC3Q9NQT5 275 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CCL15-CCL14A0A0B4J2E2 113 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PRNPP04156 253 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 LPLP06858 475 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 RRASP10301 218 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 IFNGR1P15260 489 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SLC19A1P41440 591 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CCL15Q16663 113 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 HSF5Q4G112 596 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 LEG1Q6P5S2 330 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MFSD6LQ8IWD5 586 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SMARCD2Q92925 531 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 DPH1Q9BZG8 443 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 URGCP-MRPS24S4R325 110 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 C20orf202A1L168 122 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SURF4O15260 269 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PIN1Q13526 163 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 DECR1Q16698 335 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 KCTD18Q6PI47 426 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TECPR1Q7Z6L1 1165 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SGPP2Q8IWX5 399 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 RASGEF1AQ8N9B8 481 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ECHDC3Q96DC8 303 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TEX37Q96LM6 180 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 DMRT3Q9NQL9 472 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CLTCQ00610 1675 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 LINC00862A6NCI5 91 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 A8MXE2 369 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TSPAN6O43657 245 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 AQP8O94778 261 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EIF4EP06730 217 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EPHA1P21709 976 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SLC1A3P43003 542 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CRHR2Q13324 411 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 FBXL6Q8N531 539 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 BCO1Q9HAY6 547 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SPACA1Q9HBV2 294 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 V9GY05 133 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PRRC2AP48634 2157 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ANKRD66B4E2M5 251 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ADM5C9JUS6 153 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 DIRAS3O95661 229 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF16P17020 682 aaPredicted RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SF1Q15637 639 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF792Q3KQV3 632 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 NXPE4Q6UWF7 544 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 KIAA1324Q6UXG2 1013 aaKnown RBP5.69□□□□□ -1.5
VPS13B-203ENST00000358544 FAM185AQ8N0U4 392 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ZNF619Q8N2I2 560 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 EID2Q8N6I1 236 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CHTF18Q8WVB6 975 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 KLHL15Q96M94 604 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ATOH8Q96SQ7 321 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 TXN2Q99757 166 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SLC26A5P58743 744 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 CXADRP78310 365 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 OR2T2Q6IF00 324 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PSAPL1Q6NUJ1 521 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 GHSRQ92847 366 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PELI2Q9HAT8 420 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SNX11Q9Y5W9 270 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 MON2Q7Z3U7 1717 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 SLX4Q8IY92 1834 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 PREX1Q8TCU6 1659 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 ANKRD61A6NGH8 418 aa5.69□□□□□ -1.5
VPS13B-203ENST00000358544 GPRIN2O60269 458 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms