RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 PLXND1Q9Y4D7 1925 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 URADA6NGE7 173 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 IDSB3KWA1 339 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 GOSR2O14653 212 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 NARSO43776 548 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 GMDSO60547 372 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SELENOFO60613 162 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 RP2O75695 350 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CFDP00746 253 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OR8G3PP0DMU2 310 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 F3P13726 295 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CPMP14384 443 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 TYRP1P17643 537 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SELENOPP49908 381 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 GAS6Q14393 721 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 AANATQ16613 207 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PCGF3Q3KNV8 242 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 PRRT3Q5FWE3 981 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ARSKQ6UWY0 536 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 ZNF511Q8NB15 262 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SLAIN1Q8ND83 568 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 OR2A1Q8NGT9 310 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 TSACCQ96A04 125 aaPredicted RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 MOAP1Q96BY2 351 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 RBM18Q96H35 190 aaKnown RBP6.09□□□□□ -1.43
CSDE1-203ENST00000358528 NMNAT3Q96T66 252 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 CD93Q9NPY3 652 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 POT1Q9NUX5 634 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 IL20Q9NYY1 176 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 COMMD9Q9P000 198 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 COPZ2Q9P299 210 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 SLC35A3Q9Y2D2 325 aa6.09□□□□□ -1.43
CSDE1-203ENST00000358528 HEATR5BQ9P2D3 2071 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 A0A1W2PQU0 124 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 H7C1C5 153 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 FAUP35544 74 aaKnown RBP6.09□□□□□ -1.44
CSDE1-203ENST00000358528 LCN6P62502 163 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 FUT5Q11128 374 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 SQSTM1Q13501 440 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 ARHGAP19Q14CB8 494 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 MAPK14Q16539 360 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 LGALSLQ3ZCW2 172 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-203ENST00000358528 METRNLQ641Q3 311 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 OR5M10Q6IEU7 315 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 MFSD12Q6NUT3 480 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 KIAA1324Q6UXG2 1013 aaKnown RBP6.09□□□□□ -1.44
CSDE1-203ENST00000358528 NUDT18Q6ZVK8 323 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 NR2C2APQ86WQ0 139 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 SLC35F2Q8IXU6 374 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 CMTM4Q8IZR5 234 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF563Q8TA94 476 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 CNOT9Q92600 299 aaKnown RBP6.09□□□□□ -1.44
CSDE1-203ENST00000358528 DVL3Q92997 716 aaPredicted RBP6.09□□□□□ -1.44
CSDE1-203ENST00000358528 LMF1Q96S06 567 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 C19orf43Q9BQ61 176 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 GSX2Q9BZM3 304 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 SLC6A17Q9H1V8 727 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 LHX9Q9NQ69 397 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 FBXL2Q9UKC9 423 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 NUP50Q9UKX7 468 aa6.09□□□□□ -1.44
CSDE1-203ENST00000358528 A0A1B0GW55 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 GXYLT2A0PJZ3 443 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 RBBP9O75884 186 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 EPPINO95925 133 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TPOP07202 933 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L2P0CJ85 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L3P0CJ86 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L4P0CJ87 422 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L5P0CJ88 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L6P0CJ89 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DUX4L7P0CJ90 424 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 APEHP13798 732 aaKnown RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ENPP1P22413 925 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DCTDP32321 178 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 VASPP50552 380 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SIRPAP78324 504 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 DEFB115Q30KQ5 88 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ZNF542PQ5EBM4 170 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM31Q5JXX7 168 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 FAAH2Q6GMR7 532 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 HEPHL1Q6MZM0 1159 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 LEG1Q6P5S2 330 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 NLRC3Q7RTR2 1065 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PRSS58Q8IYP2 241 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 RFLNBQ8N5W9 214 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 OR2L3Q8NG85 312 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 OR5T3Q8NGG3 340 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ANGPTL6Q8NI99 470 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 WDR34Q96EX3 536 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 PEX11GQ96HA9 241 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 MS4A3Q96HJ5 214 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TSSK2Q96PF2 358 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 MICU1Q9BPX6 476 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 ACTR6Q9GZN1 396 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 MS4A7Q9GZW8 240 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TMEM168Q9H0V1 697 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 TSPAN10Q9H1Z9 355 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 SAV1Q9H4B6 383 aaPredicted RBP6.08□□□□□ -1.44
CSDE1-203ENST00000358528 EPHX3Q9H6B9 360 aa6.08□□□□□ -1.44
CSDE1-203ENST00000358528 BCL2L10Q9HD36 194 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms