RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 ADRA2CP18825 462 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PRKACGP22612 351 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GATMP50440 423 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 HTD2P86397 168 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF852Q6ZMS4 543 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SLC46A1Q96NT5 459 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PLEKHM1Q9Y4G2 1056 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GBF1Q92538 1859 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MT-ATP6P00846 226 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 EPHX1P07099 455 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 HNRNPA1P09651 372 aaKnown RBP eCLIP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 H2BFMP0C1H6 154 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PGGHGQ32M88 737 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF792Q3KQV3 632 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 USP51Q70EK9 711 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GRHL3Q8TE85 626 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 CIB3Q96Q77 187 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 RHBGQ9H310 441 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 RASD1Q9Y272 281 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 KIR2DS1A0A191URI9 304 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PPP5D1E7EU14 171 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 KIR2DS4P43632 304 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 KIR2DS1Q14954 304 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MYEF2Q9P2K5 600 aaKnown RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 FZD7O75084 574 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 LAMP1P11279 417 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ISL1P61371 349 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DCST2Q5T1A1 773 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GTF2H5Q6ZYL4 71 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 OR6F1Q8NGZ6 308 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 OR10G6Q8NH81 332 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 FN3KRPQ9HA64 309 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GDNFP39905 211 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ETV5P41161 510 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM115Q12893 351 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 TPBGQ13641 420 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MTFR2Q6P444 385 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZFPM2Q8WW38 1151 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ST8SIA4Q92187 359 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ATOH8Q96SQ7 321 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SPNS1Q9H2V7 528 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 IL36AQ9UHA7 158 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SRPK3Q9UPE1 567 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 C9JVG2 144 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 AGRPO00253 132 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GABRPO00591 440 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DVL1O14640 695 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 IL5P05113 134 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PTAFRP25105 342 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 CTNNB1P35222 781 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DVL1P1P54792 670 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ERVFC1P60507 584 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM151AQ8N4L1 468 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF764Q96H86 408 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 NECTIN4Q96NY8 510 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 LAP3P28838 519 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MLLT10P55197 1068 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 KLBQ86Z14 1044 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GLIS1Q8NBF1 620 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SAT2Q96F10 170 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 RNF170Q96K19 258 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DPH7Q9BTV6 452 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DMRT3Q9NQL9 472 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 EXOSC3Q9NQT5 275 aaKnown RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DZANK1Q9NVP4 752 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SUSD2Q9UGT4 822 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 FAM96BQ9Y3D0 163 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PCDHGA5Q9Y5G8 931 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 LTBP3Q9NS15 1303 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ALDOBP05062 364 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PNRC1Q12796 327 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 IL10RAQ13651 578 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 LRRC32Q14392 662 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 NBPF12Q5TAG4 269 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PELI3Q8N2H9 469 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 DDIT4LQ96D03 193 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF286AQ9HBT8 521 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PRDM9Q9NQV7 894 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZFHX2Q9C0A1 2572 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GCSHP23434 173 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 RABGGTBP53611 331 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ATXN7L3Q14CW9 347 aaPredicted RBP6.16□□□□□ -1.42
VPS13B-202ENST00000357162 BCL7AQ4VC05 210 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 PODNL1Q6PEZ8 512 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 CPXM2Q8N436 756 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 L3MBTL4Q8NA19 623 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 GAL3ST4Q96RP7 486 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 TMEM218A2RU14 115 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 TMX2-CTNND1H3BSU7 103 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 SCGB1D2O95969 90 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 CPEP16870 476 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 NAGAP17050 411 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 C5AR1P21730 350 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MLC1Q15049 377 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 RAB35Q15286 201 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 ZNF74Q16587 644 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 XKR7Q5GH72 579 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 MAMDC4Q6UXC1 1216 aa6.16□□□□□ -1.42
VPS13B-202ENST00000357162 OR13C4Q8NGS5 318 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms