RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 HEXAP06865 529 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 C5AR1P21730 350 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 PPT1P50897 306 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CASP9P55211 416 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ZNF674Q2M3X9 581 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 PLA1AQ53H76 456 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 C18orf63Q68DL7 685 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 C1orf87Q8N0U7 546 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 WDR20Q8TBZ3 569 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CPEB1Q9BZB8 566 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 LYRM2Q9NU23 88 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ATG4BQ9Y4P1 393 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DSPPQ9NZW4 1301 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TBC1D3KA0A087X1G2 549 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ABHD14A-ACY1A0A1B0GW23 586 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TBC1D3BA6NDS4 549 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TBC1D3FA6NER0 549 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 BLOC1S5-TXNDC5H3BN57 136 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 IGLV3-25P01717 112 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 AOAHP28039 575 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HSPB3Q12988 150 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DHCR24Q15392 516 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 LGALSLQ3ZCW2 172 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 PABPC1L2AQ5JQF8 200 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CTSL3PQ5NE16 218 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TBC1D3GQ6DHY5 549 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TANGO2Q6ICL3 276 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ADGRE4PQ86SQ3 457 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ECHDC3Q96DC8 303 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 KLHL15Q96M94 604 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CMSS1Q9BQ75 279 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MRPS30Q9NP92 439 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DMRT3Q9NQL9 472 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SLC25A37Q9NYZ2 338 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SUSD2Q9UGT4 822 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SPTBP11277 2137 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 PPP5D1E7EU14 171 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TRIM77I1YAP6 450 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MAGEB4O15481 346 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CKMP06732 381 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HOXA9P31269 272 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GRK6P43250 576 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SRP9P49458 86 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TAS2R38P59533 333 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GSG1Q2KHT4 349 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HFE2Q6ZVN8 426 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TP53INP2Q8IXH6 220 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 OR5AK3PQ8NH89 298 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DUSP19Q8WTR2 217 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TRMT61AQ96FX7 289 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TMEM19Q96HH6 336 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ZDHHC6Q9H6R6 413 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MRPL15Q9P015 296 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GREB1Q4ZG55 1949 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 VAMP1P23763 118 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CPT2P23786 658 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CSF2RBP32927 897 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 LUMP51884 338 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 FOXO1Q12778 655 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DGKZQ13574 1117 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HLXQ14774 488 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 LGALS14Q8TCE9 139 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 OR2AG1Q9H205 316 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MTHFD2LQ9H903 347 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MRPS18AQ9NVS2 196 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DKKL1Q9UK85 242 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GTF2A1LQ9UNN4 478 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 COL11A2P13942 1736 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 FZD6O60353 706 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 OR6A2O95222 327 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ADH1CP00326 375 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GNALP38405 381 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MLC1Q15049 377 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 P2RY14Q15391 338 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 FAM171A1Q5VUB5 890 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 STEAP2Q8NFT2 490 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 CDCP1Q9H5V8 836 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 EXOSC3Q9NQT5 275 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GAR1Q9NY12 217 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 IL17CQ9P0M4 197 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 METTL1Q9UBP6 276 aaKnown RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SEC16AO15027 2179 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MYBPHLA2RUH7 354 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 FBP1P09467 338 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 GDF5P43026 501 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 MFGE8Q08431 387 aaPredicted RBP6.13□□□□□ -1.43
TRIM38-201ENST00000357085 C9orf64Q5T6V5 341 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 PSAPL1Q6NUJ1 521 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ARMC6Q6NXE6 501 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SLC35D2Q76EJ3 337 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 C6orf120Q7Z4R8 191 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TRAPPC5Q8IUR0 188 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 SLC35F2Q8IXU6 374 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 OR9A1PQ8NGU1 263 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 HUS1BQ8NHY5 278 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 ZNF461Q8TAF7 563 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 TBX5Q99593 518 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 NIPSNAP1Q9BPW8 284 aa6.13□□□□□ -1.43
TRIM38-201ENST00000357085 DHDHQ9UQ10 334 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms