RNA–Protein interactions for RNA: ENST00000356922.5

LIG4-201, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 4,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-201ENST00000356922 FAR1Q8WVX9 515 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 LZICQ8WZA0 190 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 TAAR8Q969N4 342 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 SLC47A1Q96FL8 570 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 MOGAT1Q96PD6 335 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 TACO1Q9BSH4 297 aaKnown RBP3.63□□□□□ -1.83
LIG4-201ENST00000356922 PTDSS2Q9BVG9 487 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 ADNPQ9H2P0 1102 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 PLSCR2Q9NRY7 297 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 C6orf203Q9P0P8 240 aaPredicted RBP3.63□□□□□ -1.83
LIG4-201ENST00000356922 RPS6KB2Q9UBS0 482 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 RIMS3Q9UJD0 308 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 ACAD8Q9UKU7 415 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 SLC35A3Q9Y2D2 325 aa3.63□□□□□ -1.83
LIG4-201ENST00000356922 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IGHV3-15A0A0B4J1V0 119 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 AQP12BA6NM10 295 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PDLIM1O00151 329 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SYT5O00445 386 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 GNGT2O14610 69 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 EIF4E2O60573 245 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 NPIPB7O75200 414 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 FKBP6O75344 327 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IFNA14P01570 189 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IMPDH2P12268 514 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 HK1P19367 917 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ENPP1P22413 925 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC6A8P48029 635 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 UGT2B15P54855 530 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 DSCR4P56555 118 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 SRYQ05066 204 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 MERTKQ12866 999 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC10A1Q14973 349 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 IFI44LQ53G44 452 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 VASNQ6EMK4 673 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SEM1Q6ZVN7 128 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CHMP1BQ7LBR1 199 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PRICKLE2Q7Z3G6 844 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CCDC103Q8IW40 242 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 AQP12AQ8IXF9 295 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 GPALPP1Q8IXQ4 340 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TMEM178AQ8NBL3 297 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PAPD5Q8NDF8 572 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 TNIP2Q8NFZ5 429 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 OR4K17Q8NGC6 315 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 OR14L1PQ8NHC6 308 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SMPDL3BQ92485 455 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PROX1Q92786 737 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 PMM1Q92871 262 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC38A4Q969I6 547 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZNF775Q96BV0 537 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZNF597Q96LX8 424 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLX1AQ9BQ83 275 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZNF426Q9BUY5 554 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 UGT2B28Q9BY64 529 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 EXOSC3Q9NQT5 275 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 PNPLA3Q9NST1 481 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ADPRHL2Q9NX46 363 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 BOLA1Q9Y3E2 137 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ENPP4Q9Y6X5 453 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 INTS1Q8N201 2190 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZNF469Q96JG9 3925 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 ATXN7O15265 892 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 DPM1O60762 260 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TOXO94900 526 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 POU2F1P14859 743 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 UQCRBP14927 111 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 MAKP20794 623 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 EPHA2P29317 976 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 LCN1P31025 176 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RRM2P31350 389 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CLDN18P56856 261 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 FXYD6P3P58550 94 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CRYZQ08257 329 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 KLRB1Q12918 225 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CDSNQ15517 529 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 TMEM176BQ3YBM2 270 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 SPATS1Q496A3 300 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 GLYR1Q49A26 553 aaPredicted RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC25A53Q5H9E4 307 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ALG10BQ5I7T1 473 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RAET1LQ5VY80 246 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RPUSD3Q6P087 351 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 PODNL1Q6PEZ8 512 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 RRM2BQ7LG56 351 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ZER1Q7Z7L7 766 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 EPHX4Q8IUS5 362 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 CMIPQ8IY22 773 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 DND1Q8IYX4 353 aaKnown RBP3.62□□□□□ -1.83
LIG4-201ENST00000356922 C10orf53Q8N6V4 93 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 OR9Q2Q8NGE9 314 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 OR4C15Q8NGM1 316 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 NR4A3Q92570 626 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC41A3Q96GZ6 507 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 ADGRG7Q96K78 797 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 UCN2Q96RP3 112 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SLC29A1Q99808 456 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SPATA5L1Q9BVQ7 753 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 SRXN1Q9BYN0 137 aa3.62□□□□□ -1.83
LIG4-201ENST00000356922 COQ10BQ9H8M1 238 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms