RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 KLF8O95600 359 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 THBS1P07996 1170 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 TIMP2P16035 220 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CTRB1P17538 263 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 FUT1P19526 365 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 GATMP50440 423 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 RAP2BP61225 183 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 LMAN2Q12907 356 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 ELOCQ15369 112 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 SMAD2Q15796 467 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CTRB2Q6GPI1 263 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 LETMD1Q6P1Q0 360 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 ABHD12BQ7Z5M8 362 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 DCAF4L2Q8NA75 395 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CCDC74AQ96AQ1 378 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 MED20Q9H944 212 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 PIK3C2AO00443 1686 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 MYO9BQ13459 2157 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 A6NCN8 305 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 I6L893 689 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 AQP7O14520 342 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 SDC3O75056 442 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 SNRPBP14678 240 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 BCKDHBP21953 392 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 LAP3P28838 519 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 RPS5P46782 204 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 RAB28P51157 221 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 FOXA1P55317 472 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CARD18P57730 90 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 AKR1C1Q04828 323 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 RAB35Q15286 201 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 HACD4Q5VWC8 232 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 MEPCEQ7L2J0 689 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 ZNF761Q86XN6 746 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 IMP4Q96G21 291 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 REEP6Q96HR9 211 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 LRIG1Q96JA1 1093 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 HHATLQ9HCP6 504 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 OR14J1Q9UGF5 321 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 IGLON5A6NGN9 336 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 COCHO43405 550 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 OR2C1O95371 312 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 ARHGAP1Q07960 439 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 HTR4Q13639 388 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 KIAA0141Q14154 515 aaPredicted RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 SF3B4Q15427 424 aaKnown RBP eCLIP10.35□□□□□ -0.754e-9■■■■■ 35.1
GTF3C1-201ENST00000356183 LARP4Q71RC2 724 aaKnown RBP eCLIP10.35□□□□□ -0.758e-9■□□□□ 10.8
GTF3C1-201ENST00000356183 ZNF384Q8TF68 577 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 TMEM239Q8WW34 195 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 PKMYT1Q99640 499 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 HCAR1Q9BXC0 346 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 STARD5Q9NSY2 213 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 UFSP2Q9NUQ7 469 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 SAGE1Q9NXZ1 904 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CLCF1Q9UBD9 225 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 BAZ2AQ9UIF9 1905 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 NSA2O95478 260 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 PTBP3O95758 552 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 AK1P00568 194 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 RPS25P62851 125 aaKnown RBP10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 COMMD6Q7Z4G1 85 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 OR13F1Q8NGS4 319 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 OR10Z1Q8NGY1 313 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 ADAMTS16Q8TE57 1224 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 HSD17B8Q92506 261 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 UBXN10Q96LJ8 280 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 WWTR1Q9GZV5 400 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 MYOTQ9UBF9 498 aa10.35□□□□□ -0.75
GTF3C1-201ENST00000356183 DEFB110Q30KQ9 67 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 ESCO2Q56NI9 601 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 ZNF574Q6ZN55 896 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 GAREM2Q75VX8 874 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 TMEM163Q8TC26 289 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 YIPF5Q969M3 257 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 CCNL2Q96S94 520 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 STRADBQ9C0K7 418 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 C20orf85Q9H1P6 137 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 INIPQ9NRY2 104 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 VDAC3Q9Y277 283 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 LOC102724200A0A096LPH7 203 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 CTDSP2O14595 271 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 PPP1R2P9O14990 202 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RNGTTO60942 597 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RNH1P13489 461 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 CCR6P51684 374 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 CLDN12P56749 244 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 CLVS2Q5SYC1 327 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 OR6T1Q8NGN1 323 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 IGSF8Q969P0 613 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 MUL1Q969V5 352 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 GJE1A6NN92 205 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 C21orf33P30042 268 aaPredicted RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 GIPRP48546 466 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 INHBCP55103 352 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 RBMS2Q15434 407 aaKnown RBP10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 NSDHLQ15738 373 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 FXNQ16595 210 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 HIST2H3AQ71DI3 136 aa10.34□□□□□ -0.75
GTF3C1-201ENST00000356183 TAS1R3Q7RTX0 852 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms