RNA–Protein interactions for RNA: ENST00000356162.5

CNOT4-202, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 5 BASIC

Gene CNOT4, Length 2,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-202ENST00000356162 TIMP3P35625 211 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 APOBEC1P41238 236 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 POLR2HP52434 150 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SLC7A2P52569 658 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PSME3P61289 254 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NCALDP61601 193 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 VEZF1Q14119 521 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TOMM34Q15785 309 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HSPB2Q16082 182 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NRF1Q16656 503 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RABL3Q5HYI8 236 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 EEF1A1P5Q5VTE0 462 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 XKRXQ6PP77 449 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ESPNLQ6ZVH7 1005 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HMGN2P46Q86SG4 172 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 GGNQ86UU5 652 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ARMC8Q8IUR7 673 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TNIP2Q8NFZ5 429 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 OR2T12Q8NG77 320 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF563Q8TA94 476 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RASSF5Q8WWW0 418 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SMPDL3BQ92485 455 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RND1Q92730 232 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KLHL15Q96M94 604 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TRIB1Q96RU8 372 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TM9SF2Q99805 663 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ARHGDIGQ99819 225 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TTYH2Q9BSA4 534 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TRIM8Q9BZR9 551 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 C12orf10Q9HB07 376 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SERINC1Q9NRX5 453 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CMTM6Q9NX76 183 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KLHL28Q9NXS3 571 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TNFRSF10DQ9UBN6 386 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SLC13A4Q9UKG4 626 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF337Q9Y3M9 751 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 HEATR5AQ86XA9 2040 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 DNAJC13O75165 2243 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SVILO95425 2214 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PCNX3Q9H6A9 2034 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CLDN24A6NM45 220 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NME4O00746 187 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 EIF1AYO14602 144 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SEC14L5O43304 696 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 FMO6PO60774 539 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZG16O60844 167 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MFN2O95140 757 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SYNGR4O95473 234 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 IL18BPO95998 194 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 IFNA14P01570 189 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CRHP06850 196 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 C8BP07358 591 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RNF224P0DH78 156 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CEACAM8P31997 349 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 STARP49675 285 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CLK1P49759 484 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MNAT1P51948 309 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MAP2K6P52564 334 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SESN3P58005 492 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MERTKQ12866 999 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CTU2Q2VPK5 515 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SLC25A35Q3KQZ1 300 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SPATS1Q496A3 300 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 WBP2NLQ6ICG8 309 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 C6orf89Q6UWU4 347 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 C16orf89Q6UX73 402 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CHMP1BQ7LBR1 199 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 P4HA3Q7Z4N8 544 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RANBP3LQ86VV4 465 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SLC15A3Q8IY34 581 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 PGAM4Q8N0Y7 254 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 RPRMLQ8N4K4 120 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 OR5M1Q8NGP8 315 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TAMM41Q96BW9 452 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZG16BQ96DA0 208 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF583Q96ND8 569 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 NPAS1Q99742 590 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF559Q9BR84 538 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 TACO1Q9BSH4 297 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SFXN3Q9BWM7 321 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 POLR2J2Q9GZM3 115 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 POLR2J3Q9H1A7 115 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 COQ10BQ9H8M1 238 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 SPAG4Q9NPE6 437 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 ARL8BQ9NVJ2 186 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 COQ3Q9NZJ6 369 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CHRNA9Q9UGM1 479 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 MCTS1Q9ULC4 181 aaKnown RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 CHST2Q9Y4C5 530 aa3.57□□□□□ -1.84
CNOT4-202ENST00000356162 KLF2Q9Y5W3 355 aaPredicted RBP3.57□□□□□ -1.84
CNOT4-202ENST00000356162 POLEQ07864 2286 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 DOCK7Q96N67 2140 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TMED7-TICAM2A0A0A6YYA0 188 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 A0A0G2JNJ9 132 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 A0A0J9YW62 118 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ELOVL7A1L3X0 281 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 SLC22A20A6NK97 555 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 TNFSF11O14788 317 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ADAMDEC1O15204 470 aa3.56□□□□□ -1.84
CNOT4-202ENST00000356162 ZNF208O43345 1280 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms