RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 POM121CA8CG34 1229 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 SLC16A7O60669 478 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 LYPLA2O95372 231 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 NPPAP01160 153 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 ACPPP15309 386 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 SLC6A8P48029 635 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 RAP1BP61224 184 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 RAP1AP62834 184 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 TMEM31Q5JXX7 168 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.18■□□□□ 0.183e-6■■■□□ 16.7
COL27A1-201ENST00000356083 OR1E3Q8WZA6 343 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 SCAMP2O15127 329 aaKnown RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 FCGR2AP12318 317 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 WDR4P57081 412 aaKnown RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 PCLAFQ15004 111 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 RPS10-NUDT3A0A1W2PQS6 291 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 TRAPPC13A5PLN9 417 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 RPS10P46783 165 aaKnown RBP16.18■□□□□ 0.18
COL27A1-201ENST00000356083 ALKBH6Q3KRA9 238 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 OR8G2PQ6IF36 304 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 MFSD12Q6NUT3 480 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 OR8U1Q8NH10 309 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 GIMAP1Q8WWP7 306 aa16.18■□□□□ 0.18
COL27A1-201ENST00000356083 IL4RP24394 825 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 ZFP57Q9NU63 452 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CLEC5AQ9NY25 188 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NKX6-3A6NJ46 265 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PCBD1P61457 104 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CXADRP78310 365 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SLC22A25Q6T423 547 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 LINC00597Q9H2U6 94 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SLC39A9Q9NUM3 307 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 KRBA1A5PL33 1030 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NSA2O95478 260 aaKnown RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 ONECUT2O95948 504 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SMIM17P0DL12 118 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 DRD2P14416 443 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PVRP15151 417 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PIN1Q13526 163 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PAPD4Q6PIY7 484 aaKnown RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF662Q6ZS27 426 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PINX1Q96BK5 328 aaKnown RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 LGALS12Q96DT0 336 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 FEVQ99581 238 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SMOQ99835 787 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 FZD8Q9H461 694 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CLCF1Q9UBD9 225 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 IGHG1P01857 330 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 F13BP05160 661 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 POU3F1Q03052 451 aaPredicted RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SFT2D3Q587I9 215 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NDUFAF7Q7L592 441 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CDS1Q92903 461 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NOX3Q9HBY0 568 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 PRAMEF26H0Y7S4 382 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 TAS2R31P59538 309 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 TMEM41BQ5BJD5 291 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 TIGD3Q6B0B8 471 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 OR52B6Q8NGF0 335 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 IGSF8Q969P0 613 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 APOOQ9BUR5 198 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 AQP7P3A6NL99 342 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 SIGLEC6O43699 453 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 TPT1P13693 172 aaKnown RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 ETV4P43268 484 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 HADHBP55084 474 aaKnown RBP16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NHSL2Q5HYW2 709 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 RAB41Q5JT25 222 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CHST14Q8NCH0 376 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 CHFRQ96EP1 664 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 NARFLQ9H6Q4 476 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 LGALS13Q9UHV8 139 aa16.17■□□□□ 0.18
COL27A1-201ENST00000356083 FAM183AA6NL82 134 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 TMX2-CTNND1H3BSU7 103 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 TANGO2Q6ICL3 276 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 LRRC57Q8N9N7 239 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 GPR148Q8TDV2 347 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 SORBS1Q9BX66 1292 aaKnown RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 GPR62Q9BZJ7 368 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 MMP27Q9H306 513 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 TAS2R16Q9NYV7 291 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 DHRS4L1P0CG22 281 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 CDKN2DP55273 166 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 HOXC5Q00444 222 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 PEA15Q15121 130 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ZNF813Q6ZN06 617 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 SSX9Q7RTT3 188 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 KDM8Q8N371 416 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 FAM213BQ8TBF2 198 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 TECTBQ96PL2 329 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 RIMS3Q9UJD0 308 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 FUOMA2VDF0 154 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 RRADP55042 308 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 NIPA2Q8N8Q9 360 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 AGXT2Q9BYV1 514 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 NKX1-2Q9UD57 310 aaPredicted RBP16.16■□□□□ 0.18
COL27A1-201ENST00000356083 HPGDSO60760 199 aa16.16■□□□□ 0.18
COL27A1-201ENST00000356083 ABHD16AO95870 558 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms