RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 SMOQ99835 787 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 LHX9Q9NQ69 397 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 TDP1Q9NUW8 608 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 MOKQ9UQ07 419 aa14.59□□□□□ -0.07
RTN3-205ENST00000356000 KIAA1671Q9BY89 1806 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 SERTM1A2A2V5 107 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 FMO6PO60774 539 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 NME6O75414 186 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 CLDN11O75508 207 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 YIF1AO95070 293 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 SLC25A27O95847 323 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 ELNP15502 786 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 C5AR1P21730 350 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MAT2AP31153 395 aaKnown RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 ADPRHP54922 357 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 RAC1P63000 192 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 SURF2Q15527 256 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 FAAP20Q6NZ36 180 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 ETV3LQ6ZN32 361 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 GAREM2Q75VX8 874 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 PXKQ7Z7A4 578 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 SLC7A13Q8TCU3 470 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 BRIX1Q8TDN6 353 aaKnown RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 GCDHQ92947 438 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 RHBGQ9H310 441 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 ISG20L2Q9H9L3 353 aaKnown RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 TMEM27Q9HBJ8 222 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MEPEQ9NQ76 525 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 KLK11Q9UBX7 282 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 ANGPT4Q9Y264 503 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MKRN2OSH3BPM6 223 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 PIRO00625 290 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MAN2B1O00754 1011 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 GPR182O15218 404 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 IGLV3-25P01717 112 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CD53P19397 219 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MMP11P24347 488 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 TNFRSF9Q07011 255 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 GLT8D1Q68CQ7 371 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CDC73Q6P1J9 531 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 C11orf88Q6PI97 169 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CLEC9AQ6UXN8 241 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CXXC5Q7LFL8 322 aaKnown RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 CAMKMTQ7Z624 323 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CEACAM19Q7Z692 300 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 UMODL1-AS1Q8N2C9 162 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CPNE2Q96FN4 548 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 ZFP42Q96MM3 310 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 MTERF1Q99551 399 aaKnown RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 OPN3Q9H1Y3 402 aaPredicted RBP14.58□□□□□ -0.08
RTN3-205ENST00000356000 P2RY12Q9H244 342 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 ADAMTS5Q9UNA0 930 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 KCNIP3Q9Y2W7 256 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 CCDC88CQ9P219 2028 aa14.58□□□□□ -0.08
RTN3-205ENST00000356000 TOX3O15405 576 aaPredicted RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 ARAFP10398 606 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 PTGER3P43115 390 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 RPP30P78346 268 aaKnown RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 OR10K2Q6IF99 312 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 LRRTM1Q86UE6 522 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 C1QL4Q86Z23 238 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 CMTM4Q8IZR5 234 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 OR2L5Q8NG80 312 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 DTD1Q8TEA8 209 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 ATG4CQ96DT6 458 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 DEFB118Q96PH6 123 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 TRIB3Q96RU7 358 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 GPR61Q9BZJ8 451 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 CKAP5Q14008 2032 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 COL4A4P53420 1690 aaPredicted RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 TSPAN3O60637 253 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 CD8AP01732 235 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 TRAM1Q15629 374 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 USF2Q15853 346 aaPredicted RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 UBE2NLQ5JXB2 153 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 NSUN5P2Q63ZY6 315 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 UBE2R2Q712K3 238 aaPredicted RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 DPPA4Q7L190 304 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 UBAC2Q8NBM4 344 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 TNFAIP8L1Q8WVP5 186 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 FCAMRQ8WWV6 532 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 RFKQ969G6 155 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 PSMG2Q969U7 264 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 ALG8Q9BVK2 526 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 PLA2G12AQ9BZM1 189 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 FAM86C1Q9NVL1 165 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 ASF1AQ9Y294 204 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 SLC35A3Q9Y2D2 325 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 MMACHCQ9Y4U1 282 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 EVPLQ92817 2033 aa14.57□□□□□ -0.08
RTN3-205ENST00000356000 TNRC18O15417 2968 aaPredicted RBP14.57□□□□□ -0.08
RTN3-205ENST00000356000 RNF222A6NCQ9 220 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 SLC25A4P12235 298 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 TBXA2RP21731 343 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 PDHA2P29803 388 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 MC4RP32245 332 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 MORN1Q5T089 497 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 MON1AQ86VX9 555 aa14.56□□□□□ -0.08
RTN3-205ENST00000356000 TEX19Q8NA77 164 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms