RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 C2CD3Q4AC94 2353 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 SULT2B1O00204 365 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 IL6P05231 212 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 NR2F1P10589 423 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TFPIP10646 304 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TACR3P29371 465 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 HPCAP84074 193 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 PAGE3Q5JUK9 113 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 SFRP5Q5T4F7 317 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 GRINAQ7Z429 371 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TMEM234Q8WY98 164 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 MAL2Q969L2 176 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TMEM19Q96HH6 336 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 REXO5Q96IC2 774 aaKnown RBP14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TMEM204Q9BSN7 226 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 LIPT1Q9Y234 373 aa14.81□□□□□ -0.04
PDLIM7-201ENST00000355572 TMED7-TICAM2A0A0A6YYA0 188 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 FAM234BA2RU67 622 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 LYZL6O75951 148 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 IGHV3-9P01782 118 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 PABPC4LP0CB38 370 aaKnown RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 IGHV1-2P23083 117 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 APOBEC1P41238 236 aaKnown RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 CRATP43155 626 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 DSTNP60981 165 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 BEX5Q5H9J7 111 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 GTF2IRD2BQ6EKJ0 949 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 ZNF704Q6ZNC4 412 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 GTF2IRD2Q86UP8 949 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 MIER2Q8N344 545 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 CIARTQ8N365 385 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 SLC43A2Q8N370 569 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 TRIML2Q8N7C3 387 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 OIT3Q8WWZ8 545 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 THOC1Q96FV9 657 aaKnown RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 IKZF5Q9H5V7 419 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 MTHFD2LQ9H903 347 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 GP6Q9HCN6 339 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 TCF7L2Q9NQB0 619 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 BEX4Q9NWD9 120 aaPredicted RBP14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 NPAP1Q9NZP6 1156 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 KLHL9Q9P2J3 617 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 TMED7Q9Y3B3 224 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 USF3Q68DE3 2245 aa14.8□□□□□ -0.04
PDLIM7-201ENST00000355572 MAP1AP78559 2803 aaPredicted RBP14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 ZFHX3Q15911 3703 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 CDHR4A6H8M9 788 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 FRS3O43559 492 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 SASH3O75995 380 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 KRT75O95678 551 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 PMS2P2O95744 297 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 MRPL19P49406 292 aaKnown RBP14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 NKX6-1P78426 367 aaPredicted RBP14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 BNIP2Q12982 314 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 C6orf10Q5SRN2 563 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 MTDHQ86UE4 582 aaKnown RBP14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 STK32CQ86UX6 486 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 OR52P1PQ8NH57 321 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 ITCHQ96J02 903 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 ADAM19Q9H013 955 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 SERINC1Q9NRX5 453 aa14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 ZNF443Q9Y2A4 671 aaPredicted RBP14.79□□□□□ -0.04
PDLIM7-201ENST00000355572 IGKV3D-15A0A087WSY6 115 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 TRBV5-3A0A0A0MS03 114 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 ZNF724A8MTY0 619 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 DBIP07108 87 aaKnown RBP14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 H2AFXP16104 143 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 PPP3CBP16298 524 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 IL7RP16871 459 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 AQP5P55064 265 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 RIPPLY3P57055 190 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 OR2B6P58173 313 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 H3F3AP84243 136 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 HOXC5Q00444 222 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 LRRC74AQ0VAA2 488 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 RGNQ15493 299 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 BLOC1S3Q6QNY0 202 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 Q6ZT83 130 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 MSANTD1Q6ZTZ1 278 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 SERPINA11Q86U17 422 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 CMIPQ8IY22 773 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 SLC25A43Q8WUT9 341 aaPredicted RBP14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 OR10A4Q9H209 315 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 P2RX2Q9UBL9 471 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 MTORP42345 2549 aa14.78□□□□□ -0.04
PDLIM7-201ENST00000355572 DPRXA6NFQ7 191 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 CFAP73A6NFT4 308 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 CLIC1O00299 241 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 NR5A2O00482 541 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 FAAHO00519 579 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 ANP32DO95626 131 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 COX5AP20674 150 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 ADSLP30566 484 aaPredicted RBP14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 POLR2HP52434 150 aaKnown RBP14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 PPP2R2AP63151 447 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 ITGADQ13349 1161 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 Q5PR19 223 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 NCMAPQ5T1S8 102 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 LRIF1Q5T3J3 769 aa14.77□□□□□ -0.05
PDLIM7-201ENST00000355572 Q71RC1 249 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms