RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 PDCD1LG2Q9BQ51 273 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 JAM3Q9BX67 310 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 MCCC2Q9HCC0 563 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 LYRM4Q9HD34 91 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 BRD7Q9NPI1 651 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 GNG8Q9UK08 70 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 SATB2Q9UPW6 733 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 AK6Q9Y3D8 172 aaKnown RBP18.02■□□□□ 0.48
COL13A1-201ENST00000354547 A0A0A6YYC8 382 aaPredicted RBP18.02■□□□□ 0.48
COL13A1-201ENST00000354547 A0A0A6YYJ9 748 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 A0A0B4J2E0 115 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 A0A1B0GX12 115 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 C2orf74A8MZ97 194 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 I3L1I5 382 aaPredicted RBP18.02■□□□□ 0.48
COL13A1-201ENST00000354547 ARHGEF9O43307 516 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 SLC43A1O75387 559 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 RAB3BP20337 219 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 HTR2BP41595 481 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 GZMKP49863 264 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 PGDP52209 483 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 MAT1AQ00266 395 aaKnown RBP18.02■□□□□ 0.48
COL13A1-201ENST00000354547 GALK2Q01415 458 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 LYPD8Q6UX82 237 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 GATSQ8NAP1 163 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 OR13H1Q8NG92 308 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 OR6K6Q8NGW6 343 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 SPACA7Q96KW9 195 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 PGLYRP3Q96LB9 341 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 CITED4Q96RK1 184 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 STACQ99469 402 aa18.02■□□□□ 0.48
COL13A1-201ENST00000354547 TFP02787 698 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SYPP08247 313 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ERP29P30040 261 aaKnown RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 PSG6Q00889 435 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 PRSS45Q7RTY3 260 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 GPALPP1Q8IXQ4 340 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TIGD4Q8IY51 512 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TCTE3Q8IZS6 198 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 BMPERQ8N8U9 685 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SNX33Q8WV41 574 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ZNRF4Q8WWF5 429 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 THAP4Q8WY91 577 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 AKAP1Q92667 903 aaKnown RBP eCLIP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 GAS2L1Q99501 681 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 GPR174Q9BXC1 333 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SLA2Q9H6Q3 261 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 KLHL21Q9UJP4 597 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ARID1BQ8NFD5 2236 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 A0A087WV62 115 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 MCIDASD6RGH6 385 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 CHP2O43745 196 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 FCN2Q15485 313 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TMEM92Q6UXU6 159 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 PARGQ86W56 976 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SLC37A2Q8TED4 501 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 RSC1A1Q92681 617 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 DNAJA3Q96EY1 480 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 MRPL15Q9P015 296 aaKnown RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 RPS6KB2Q9UBS0 482 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF222Q9UK12 451 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 PCOLCE2Q9UKZ9 415 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 A0A0G2JK05 382 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 OR2B3O76000 313 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SLC6A6P31641 620 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 CTHP32929 405 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TPMTP51580 245 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 RPL13AP3Q6NVV1 102 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 KIRREL2Q6UWL6 708 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 TAF8Q7Z7C8 310 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF655Q8N720 491 aaPredicted RBP18.01■□□□□ 0.47
COL13A1-201ENST00000354547 SNAPC3Q92966 411 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 OR14A2Q96R54 314 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 NMNAT3Q96T66 252 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 GSDMCQ9BYG8 508 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 ACOXLQ9NUZ1 547 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 CACNG2Q9Y698 323 aa18.01■□□□□ 0.47
COL13A1-201ENST00000354547 HEATR5AQ86XA9 2040 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 A0A1B0GVT2 93 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 C4orf47A7E2U8 309 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 IDSB3KWA1 339 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 ST6GAL1P15907 406 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 DRD5P21918 477 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 SLC2A5P22732 501 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 AHCYP23526 432 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 SLC6A1P30531 599 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 ACAA2P42765 397 aaKnown RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 DGCR2P98153 550 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 MAB21L1Q13394 359 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF267Q14586 743 aaPredicted RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF613Q6PF04 617 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 BEST4Q8NFU0 473 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 ZFAND1Q8TCF1 268 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 HMGB4Q8WW32 186 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 TRIM63Q969Q1 353 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 CLIP3Q96DZ5 547 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 RBM18Q96H35 190 aaKnown RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 ZNF346Q9UL40 294 aaKnown RBP18■□□□□ 0.47
COL13A1-201ENST00000354547 APBB3O95704 486 aa18■□□□□ 0.47
COL13A1-201ENST00000354547 IFNGP01579 166 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms