RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 CA7P43166 264 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 KCNC4Q03721 635 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 PIN1Q13526 163 aaPredicted RBP19.93■□□□□ 0.78
SHMT1-203ENST00000354098 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.93■□□□□ 0.78
SHMT1-203ENST00000354098 RTL6Q6ICC9 239 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 ULK3Q6PHR2 472 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 MEIOBQ8N635 442 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 RNF217Q8TC41 542 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 ADGRG7Q96K78 797 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 KLHL15Q96M94 604 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 STOML1Q9UBI4 398 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 POLEQ07864 2286 aa19.93■□□□□ 0.78
SHMT1-203ENST00000354098 ZC3H12DA2A288 527 aaKnown RBP19.92■□□□□ 0.78
SHMT1-203ENST00000354098 J3KTA2 159 aa19.92■□□□□ 0.78
SHMT1-203ENST00000354098 IFNW1P05000 195 aa19.92■□□□□ 0.78
SHMT1-203ENST00000354098 DNAJA4Q8WW22 397 aaPredicted RBP19.92■□□□□ 0.78
SHMT1-203ENST00000354098 UTP4Q969X6 686 aaKnown RBP19.92■□□□□ 0.78
SHMT1-203ENST00000354098 ZNF845Q96IR2 970 aaPredicted RBP19.92■□□□□ 0.78
SHMT1-203ENST00000354098 ARL5BQ96KC2 179 aa19.92■□□□□ 0.78
SHMT1-203ENST00000354098 MMADHCQ9H3L0 296 aaPredicted RBP19.92■□□□□ 0.78
SHMT1-203ENST00000354098 FAM215AQ9Y5M1 114 aa19.92■□□□□ 0.78
SHMT1-203ENST00000354098 A0A1W2PNR3 127 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 AHRRA9YTQ3 701 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ADAMDEC1O15204 470 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 LYPD3O95274 346 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SEMG1P04279 462 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 FUT4P22083 530 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ACVR2AP27037 513 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SYT14P1Q58G82 188 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ZNF613Q6PF04 617 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SLC38A4Q969I6 547 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 C7orf34Q96L11 122 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 TP63Q9H3D4 680 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ELOA3DA6NLF2 546 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 FIGNL2A6NMB9 653 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 WDR1O75083 606 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 TFPIP10646 304 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 PTNP21246 168 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 CASP6P55212 293 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 VLDLRP98155 873 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 FOXD4Q12950 439 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ELOA3BQ3SY89 546 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ACSF3Q4G176 576 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 MTX3Q5HYI7 312 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 RPTNQ6XPR3 784 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ESPNLQ6ZVH7 1005 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 NCCRP1Q6ZVX7 275 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ELOA3Q8NG57 546 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 OR10D3Q8NH80 312 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 OR2V1Q8NHB1 315 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 ZPLD1Q8TCW7 415 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SLC47A1Q96FL8 570 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 LRGUKQ96M69 825 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 OR5B2Q96R09 309 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SEPHS2Q99611 448 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 COQ10BQ9H8M1 238 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SLC7A7Q9UM01 511 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 A4GNTQ9UNA3 340 aa19.91■□□□□ 0.78
SHMT1-203ENST00000354098 SPIN1Q9Y657 262 aaPredicted RBP19.91■□□□□ 0.78
SHMT1-203ENST00000354098 TRAPPC13A5PLN9 417 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 GJE1A6NN92 205 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 CLCA1A8K7I4 914 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 J3QKU1 62 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 hCG_2039718K7EN88 272 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 FFAR1O14842 300 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 ZNF208O43345 1280 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 CXCL13O43927 109 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 STAMBPO95630 424 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 GABRA1P14867 456 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 SLC7A1P30825 629 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 EIF1AXP47813 144 aaKnown RBP19.9■□□□□ 0.78
SHMT1-203ENST00000354098 ERFP50548 548 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 TAS2R41P59536 307 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 FLOT2Q14254 428 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 HBMQ6B0K9 141 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 WDR88Q6ZMY6 472 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 GDF7Q7Z4P5 450 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 YTHDF3Q7Z739 585 aaKnown RBP19.9■□□□□ 0.78
SHMT1-203ENST00000354098 FJX1Q86VR8 437 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 P3H2Q8IVL5 708 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 SLC25A43Q8WUT9 341 aaPredicted RBP19.9■□□□□ 0.78
SHMT1-203ENST00000354098 SLC41A3Q96GZ6 507 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 TRIB1Q96RU8 372 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 C12orf10Q9HB07 376 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 SELENONQ9NZV5 590 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 NDUFAF4Q9P032 175 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 RHCGQ9UBD6 479 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 RIMS3Q9UJD0 308 aa19.9■□□□□ 0.78
SHMT1-203ENST00000354098 A0A087WUJ7 227 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 LRRTM2O43300 516 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 PNMTP11086 282 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 EGR4Q05215 589 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 ESPL1Q14674 2120 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 IQCCQ4KMZ1 466 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 C1orf185Q5T7R7 199 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 ADGRE4PQ86SQ3 457 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 OSTF1Q92882 214 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 ENPP4Q9Y6X5 453 aa19.89■□□□□ 0.77
SHMT1-203ENST00000354098 IGKV1D-42A0A075B6H8 117 aa19.88■□□□□ 0.77
SHMT1-203ENST00000354098 CCL21O00585 134 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms