RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ANGPT1Q15389 498 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 PLA1AQ53H76 456 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 SMUG1Q53HV7 270 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 TRIM61Q5EBN2 209 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 FAM205BPQ63HN1 556 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM64Q6YI46 380 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 DGAT2L6Q6ZPD8 337 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 NRMQ8IXM6 262 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 CA13Q8N1Q1 262 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 FAM109AQ8N4B1 249 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 EID2Q8N6I1 236 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 OR51G2Q8NGK0 314 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 PIGXQ8TBF5 258 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 OSTF1Q92882 214 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 OR7D2Q96RA2 312 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 UBL7Q96S82 380 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 THAP7Q9BT49 309 aaPredicted RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 RBCK1Q9BYM8 510 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 HINT3Q9NQE9 182 aaKnown RBP7.93□□□□□ -1.14
TRIM55-204ENST00000353317 PTGFRNQ9P2B2 879 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ADAM30Q9UKF2 790 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 FBXO4Q9UKT5 387 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 SLC22A7Q9Y694 548 aa7.93□□□□□ -1.14
TRIM55-204ENST00000353317 ZC3H12DA2A288 527 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CPED1A4D0V7 1026 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SYT5O00445 386 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 KLF4O43474 513 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 RNF13O43567 381 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 GDF9O60383 454 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FCMRO60667 390 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 EIF4EP06730 217 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FOLR1P15328 257 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TBXA2RP21731 343 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FPR3P25089 353 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 BTCP35070 178 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TSFMP43897 325 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ARFIP1P53367 373 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SHC2P98077 582 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TGM3Q08188 693 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 MRPL28Q13084 256 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SUZ12Q15022 739 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CEBPEQ15744 281 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 PGGHGQ32M88 737 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FAM27D1Q5T7N8 215 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 BCL2L15Q5TBC7 163 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 BHLHB9Q6PI77 547 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SMARCD3Q6STE5 483 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF620Q6ZNG0 422 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CPOQ8IVL8 374 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SRFBP1Q8NEF9 429 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 OR5M3Q8NGP4 307 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 OR9A2Q8NGT5 310 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 OR4C6Q8NH72 309 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TMEM255BQ8WV15 326 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ACOT11Q8WXI4 607 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TTC9Q92623 222 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 KAT2AQ92830 837 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ZNF285Q96NJ3 590 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SERINC2Q96SA4 455 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ABCG5Q9H222 651 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SYNDIG1Q9H7V2 258 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CYSLTR2Q9NS75 346 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 NLGN3Q9NZ94 848 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TNFRSF10DQ9UBN6 386 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 EPHA6Q9UF33 1036 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TEKT2Q9UIF3 430 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 A0A1W2PQ72 361 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TLCD2A6NGC4 264 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 MEN1O00255 615 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FGF17O60258 216 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 NOS1APO75052 506 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TSC22D2O75157 780 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 HK1P19367 917 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SHC1P29353 583 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 HOXD11P31277 338 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 UQCRC1P31930 480 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 THBS2P35442 1172 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 MC3RP41968 323 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SRP9P49458 86 aaKnown RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 EFNA3P52797 238 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ATP12AP54707 1039 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FOXL2P58012 376 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TNFRSF17Q02223 184 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FCN2Q15485 313 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 HBMQ6B0K9 141 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 LRRC28Q86X40 367 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 RCBTB1Q8NDN9 531 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 OR2T33Q8NG76 320 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 SUN5Q8TC36 379 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.92□□□□□ -1.14
TRIM55-204ENST00000353317 ACOT12Q8WYK0 555 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 HSD17B8Q92506 261 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TCTN2Q96GX1 697 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 TBX5Q99593 518 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 CCDC3Q9BQI4 270 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 FAIM2Q9BWQ8 316 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 RAB33BQ9H082 229 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 MED17Q9NVC6 651 aa7.92□□□□□ -1.14
TRIM55-204ENST00000353317 STMN3Q9NZ72 180 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms