RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 ABCB10Q9NRK6 738 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 RHBDL2Q9NX52 303 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 YARS2Q9Y2Z4 477 aaKnown RBP15.31■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF337Q9Y3M9 751 aa15.31■□□□□ 0.04
SAMM50-201ENST00000350028 COL5A1P20908 1838 aaPredicted RBP15.3■□□□□ 0.04
SAMM50-201ENST00000350028 C2orf92A0A1B0GVN3 265 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 GNB5O14775 395 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 ZNF264O43296 627 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 TBX1O43435 398 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 HLA-DPB1P04440 258 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 GALP22466 123 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 TNFSF8P32971 234 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 DHPSP49366 369 aaPredicted RBP15.3■□□□□ 0.04
SAMM50-201ENST00000350028 FABP5Q01469 135 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 POU4F2Q12837 409 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 SKP2Q13309 424 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 GALEQ14376 348 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 NSDHLQ15738 373 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 VWA2Q5GFL6 755 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 DPY19L2P2Q6ZN68 376 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 KLBQ86Z14 1044 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 TMEM99Q8N816 258 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 DRAXINQ8NBI3 349 aaPredicted RBP15.3■□□□□ 0.04
SAMM50-201ENST00000350028 PLPP5Q8NEB5 264 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 ATP6V1C2Q8NEY4 427 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 WDFY2Q96P53 400 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 NUDT22Q9BRQ3 303 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 ALG8Q9BVK2 526 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 BABAM2Q9NXR7 383 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 CHRNA9Q9UGM1 479 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 SRPK3Q9UPE1 567 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 PCDHGB6Q9Y5F9 930 aa15.3■□□□□ 0.04
SAMM50-201ENST00000350028 ZC3H12DA2A288 527 aaKnown RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ELOA3DA6NLF2 546 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TO15178 435 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SBK2P0C263 348 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 CELP19835 753 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 EPHA8P29322 1005 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 CAPZA2P47755 286 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 CD226Q15762 336 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TBC1D25Q3MII6 688 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ELOA3BQ3SY89 546 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 FCRLBQ6BAA4 426 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 B3GLCTQ6Y288 498 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 LSRQ86X29 649 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ZFP41Q8N8Y5 198 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 GATSQ8NAP1 163 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ELOA3Q8NG57 546 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 OR5M3Q8NGP4 307 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TM9SF2Q99805 663 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TMEM43Q9BTV4 400 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 LAT2Q9GZY6 243 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 USP34Q70CQ2 3546 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SLC35F4A4IF30 521 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 OR6C76A6NM76 312 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 PRKNO60260 465 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 REM1O75628 298 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SLC6A8P48029 635 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SLC16A1P53985 500 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 MXD1Q05195 221 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 EBPQ15125 230 aaKnown RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 NR0B2Q15466 257 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ISXQ2M1V0 245 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 C1orf189Q5VU69 101 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 KANSL1Q7Z3B3 1105 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 ATG4DQ86TL0 474 aaPredicted RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SLC22A16Q86VW1 577 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 OR10H4Q8NGA5 316 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 OR52E2Q8NGJ4 325 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SNRNP27Q8WVK2 155 aaKnown RBP15.29■□□□□ 0.04
SAMM50-201ENST00000350028 GAL3ST4Q96RP7 486 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 CCDC32Q9BV29 185 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TPK1Q9H3S4 243 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SP140LQ9H930 580 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 COPS7AQ9UBW8 275 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 SUSD2Q9UGT4 822 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TRAPPC4Q9Y296 219 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 CMAHPQ9Y471 501 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 IER3IP1Q9Y5U9 82 aa15.29■□□□□ 0.04
SAMM50-201ENST00000350028 TTC28Q96AY4 2481 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 A0A1B0GTQ1 180 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ARPC3O15145 178 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 RGS5O15539 181 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 OIP5O43482 229 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 IDH3BO43837 385 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 CLEC2LP0C7M8 214 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 CD53P19397 219 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 SDC2P34741 201 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 GRK6P43250 576 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 RANBP1P43487 201 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 EFNA3P52797 238 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 PRPS1P60891 318 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ACTC1P68032 377 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ACTA1P68133 377 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 PSPHP78330 225 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 ACY1Q03154 408 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 HNRNPA0Q13151 305 aaKnown RBP15.28■□□□□ 0.04
SAMM50-201ENST00000350028 TSSK4Q6SA08 328 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 APOOLQ6UXV4 268 aa15.28■□□□□ 0.04
SAMM50-201ENST00000350028 SLC29A4Q7RTT9 530 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms