RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 UQCRC1P31930 480 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 OR3A3P47888 321 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 CRYZQ08257 329 aaKnown RBP16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 GPR18Q14330 331 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 SCMH1Q96GD3 660 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 CDCP1Q9H5V8 836 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 ZFP64Q9NPA5 681 aa16.68■□□□□ 0.26
PTP4A3-202ENST00000349124 TEX13CA0A0J9YWL9 993 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 C4orf47A7E2U8 309 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 FAM171A2A8MVW0 826 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 CYR61O00622 381 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 BRINP1O60477 761 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 IGKV1D-16P01601 117 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 BTG1P62324 171 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 FAM53BQ14153 422 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 NNATQ16517 81 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 FAM209AQ5JX71 171 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 TOMM5Q8N4H5 51 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 CDRT4Q8N9R6 151 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 OR6C4Q8NGE1 309 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 C17orf50Q8WW18 174 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 PELI1Q96FA3 418 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 SCARF2Q96GP6 870 aaPredicted RBP16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 OR14A2Q96R54 314 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 TMEM27Q9HBJ8 222 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 NKIRAS2Q9NYR9 191 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF346Q9UL40 294 aaKnown RBP16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 HEBP2Q9Y5Z4 205 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 CACNA1IQ9P0X4 2223 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 C5orf67F2Z3F1 127 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 PEPDP12955 493 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 BICRALQ6AI39 1079 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 PYHIN1Q6K0P9 492 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 CREB3L2Q70SY1 520 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 OR52R1Q8NGF1 315 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 KCTD12Q96CX2 325 aaKnown RBP16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 DERL3Q96Q80 235 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 GPR174Q9BXC1 333 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 CACNG6Q9BXT2 260 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 AUNIPQ9H7T9 357 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 FOLH1BQ9HBA9 442 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 DUSP22Q9NRW4 184 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 ACTR10Q9NZ32 417 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 TMEM5Q9Y2B1 443 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 IER3IP1Q9Y5U9 82 aa16.67■□□□□ 0.26
PTP4A3-202ENST00000349124 GPR75O95800 540 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 EPXP11678 715 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF3P17036 446 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 NRG3P56975 720 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 POU6F2P78424 691 aaPredicted RBP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 GPALPP1Q8IXQ4 340 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 FAM98AQ8NCA5 519 aaKnown RBP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 ZPLD1Q8TCW7 415 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF431Q8TF32 576 aaPredicted RBP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 DACT3Q96B18 629 aaPredicted RBP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 HYLS1Q96M11 299 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 A0A0B4J2E0 115 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 A0A1B0GX12 115 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 SERPINI2O75830 405 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 DHFRP00374 187 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 WNT1P04628 370 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 GRPRP30550 384 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 ACAA2P42765 397 aaKnown RBP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 RPS11P62280 158 aaKnown RBP eCLIP16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 TPRA1Q86W33 373 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 OR51Q1Q8NH59 317 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 BMFQ96LC9 184 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 OR51J1Q9H342 316 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 TRPV4Q9HBA0 871 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 GDE1Q9NZC3 331 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 FLVCR2Q9UPI3 526 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
PTP4A3-202ENST00000349124 MCIDASD6RGH6 385 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 ATP1B1P05026 303 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 GDI2P50395 445 aaKnown RBP16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 ALG10BQ5I7T1 473 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 EXOSC6Q5RKV6 272 aaKnown RBP16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 RTL4Q6ZR62 310 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 RFPL4BQ6ZWI9 263 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 SERPINA12Q8IW75 414 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 SAMD14Q8IZD0 417 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 MYADMQ96S97 322 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 DPAGT1Q9H3H5 408 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 COPS3Q9UNS2 423 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 KCNJ13O60928 360 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 CDC123O75794 336 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 CBX7O95931 251 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 SSTR2P30874 369 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 DEFB110Q30KQ9 67 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 ZNF542PQ5EBM4 170 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 STPG1Q5TH74 334 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 SFRP4Q6FHJ7 346 aaPredicted RBP16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 GNG8Q9UK08 70 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 DTX4Q9Y2E6 619 aa16.65■□□□□ 0.26
PTP4A3-202ENST00000349124 ANKRD61A6NGH8 418 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 PTHLHP12272 177 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 STOMP27105 288 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 MAP3K8P41279 467 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 CLDN12P56749 244 aa16.64■□□□□ 0.25
PTP4A3-202ENST00000349124 ST3GAL2Q16842 350 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms