RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CLEC4MQ9H2X3 399 aaPredicted RBP14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 COQ10BQ9H8M1 238 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 KLHL28Q9NXS3 571 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 SLC25A37Q9NYZ2 338 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 EMC3Q9P0I2 261 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 KLHL13Q9P2N7 655 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 RPS6KB2Q9UBS0 482 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 TMED7Q9Y3B3 224 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 GMEB1Q9Y692 573 aa14.09□□□□□ -0.15
TSPAN4-201ENST00000346501 ZNF208O43345 1280 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 EIF1BO60739 113 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 PMS2P2O95744 297 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 CGAP01215 116 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 ARAFP10398 606 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 PPP3CBP16298 524 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 GPX2P18283 190 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 TACR3P29371 465 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 AGTR1P30556 359 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 NCALDP61601 193 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 GUCY1A3Q02108 690 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 GUSBP1Q15486 140 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 MTDHQ86UE4 582 aaKnown RBP14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 DPP10Q8N608 796 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 C11orf65Q8NCR3 313 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 PIGXQ8TBF5 258 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 MAL2Q969L2 176 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 NAA11Q9BSU3 229 aaPredicted RBP14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 CCDC134Q9H6E4 229 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 TMEM38AQ9H6F2 299 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 C12orf49Q9H741 205 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 EVA1AQ9H8M9 152 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 RASSF1Q9NS23 344 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 RLIMQ9NVW2 624 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 SELENONQ9NZV5 590 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 SLAMF8Q9P0V8 285 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 TMEM181Q9P2C4 612 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 ABCA12Q86UK0 2595 aa14.08□□□□□ -0.16
TSPAN4-201ENST00000346501 ITPR2Q14571 2701 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 AP3D1O14617 1153 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 GPR171O14626 319 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 BCAS1O75363 584 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 NUDT7P0C024 238 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 GKN3PP0CG01 181 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 ADSLP30566 484 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 UGT2B10P36537 528 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 MDH1P40925 334 aaKnown RBP14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 OR2B6P58173 313 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 SLC35A1P78382 337 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 RBBP4Q09028 425 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 SCARB2Q14108 478 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 RUNDC3AQ59EK9 446 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 ZNF474Q6S9Z5 364 aaPredicted RBP14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 ADGRG3Q86Y34 549 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 SLC30A8Q8IWU4 369 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 TUSC5Q8IXB3 177 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 PCYOX1LQ8NBM8 494 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 HIPK4Q8NE63 616 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 ANKRD27Q96NW4 1050 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 CGREF1Q99674 301 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 TAPBPLQ9BX59 468 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 ZNF385DQ9H6B1 395 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 SLC52A3Q9NQ40 469 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 KLHL14Q9P2G3 628 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 OSGIN1Q9UJX0 560 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 TRAPPC4Q9Y296 219 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 CELSR2Q9HCU4 2923 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 CRYBG3Q68DQ2 2970 aa14.07□□□□□ -0.16
TSPAN4-201ENST00000346501 IGHV3-15A0A0B4J1V0 119 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 BBIP1A8MTZ0 92 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 CYTIPO60759 359 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 FESP07332 822 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 HOXB9P17482 250 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 PRKAR1BP31321 381 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 MAPK11Q15759 364 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 INTS11Q5TA45 600 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 DLEU7Q6UYE1 221 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 MSRB3Q8IXL7 192 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 ZNF100Q8IYN0 542 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 USB1Q9BQ65 265 aaKnown RBP14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 CPPED1Q9BRF8 314 aaPredicted RBP14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 HDHD5Q9BXW7 423 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 BCO1Q9HAY6 547 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 GID8Q9NWU2 228 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 ITGB1BP2Q9UKP3 347 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 GPR52Q9Y2T5 361 aa14.06□□□□□ -0.16
TSPAN4-201ENST00000346501 MPDZO75970 2070 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 TRBV5-3A0A0A0MS03 114 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 ZNF724A8MTY0 619 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 SMAD9O15198 467 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 NPPAP01160 153 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 GPIP06744 558 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 IDUAP35475 653 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 KRTAP10-9P60411 292 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 SF3A3Q12874 501 aaKnown RBP eCLIP14.05□□□□□ -0.164e-13■□□□□ 10.4
TSPAN4-201ENST00000346501 PDK3Q15120 406 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 TRMT5Q32P41 509 aaKnown RBP14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 GALNT5Q7Z7M9 940 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 ARMC8Q8IUR7 673 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 CLIP4Q8N3C7 705 aa14.05□□□□□ -0.16
TSPAN4-201ENST00000346501 STEAP2Q8NFT2 490 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms