RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ETFBKMTQ8IXQ9 262 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 CCDC36Q8IYA8 594 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 PRR22Q8IZ63 422 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 HAVCR2Q8TDQ0 301 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 OR5M11Q96RB7 305 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 PRDM9Q9NQV7 894 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 SLC6A13Q9NSD5 602 aa10.15□□□□□ -0.79
CLCN6-202ENST00000346436 TRBV4-1A0A0J9YWV2 114 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF587BE7ETH6 402 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF749O43361 778 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 SLC10A1Q14973 349 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 BCL2L15Q5TBC7 163 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 LYPD8Q6UX82 237 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TRIM46Q7Z4K8 759 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 OR5K2Q8NHB8 316 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TXNDC15Q96J42 360 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TMEM45AQ9NWC5 275 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 PLEK2Q9NYT0 353 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 MRPL15Q9P015 296 aaKnown RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TAF1LQ8IZX4 1826 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TRAPPC13A5PLN9 417 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 RNASET2O00584 256 aaKnown RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 HNF1AP20823 631 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 F8A1P23610 371 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CD82P27701 267 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 KCNJ8Q15842 424 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 BCL7AQ4VC05 210 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 PLAG1Q6DJT9 500 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 LRFN4Q6PJG9 635 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 RHOXF1Q8NHV9 184 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 GPBAR1Q8TDU6 330 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 VRK1Q99986 396 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 TP63Q9H3D4 680 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ELOVL3Q9HB03 270 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 RXFP3Q9NSD7 469 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 RLIMQ9NVW2 624 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 OR7A10O76100 309 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 NKX3-2P78367 333 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CNN3Q15417 329 aaKnown RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 NKAIN2Q5VXU1 208 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 STEAP3Q658P3 488 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF613Q6PF04 617 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 GRPEL2Q8TAA5 225 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CA5BP1Q8WTZ4 195 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 SENP5Q96HI0 755 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 INSM2Q96T92 566 aaPredicted RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 KCNIP3Q9Y2W7 256 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 C12orf71A8MTZ7 269 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 D6RAR5 112 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 GLCEO94923 617 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 IGHG1P01857 330 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 GNRHRP30968 328 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 SLC26A5P58743 744 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 PRDX1Q06830 199 aaKnown RBP10.14□□□□□ -0.79
CLCN6-202ENST00000346436 OR7A5Q15622 319 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CHRFAM7AQ494W8 412 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 DHRS13Q6UX07 377 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 METTL4Q8N3J2 472 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ACOT4Q8N9L9 421 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CFHR5Q9BXR6 569 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 CDCP1Q9H5V8 836 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 NTN4Q9HB63 628 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 VNN3Q9NY84 501 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 ZNF226Q9NYT6 803 aa10.14□□□□□ -0.79
CLCN6-202ENST00000346436 DISC1C4P0D8 188 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 INMT-MINDY4F8WBC2 141 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 TOXO94900 526 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 GRPRP30550 384 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 NAA10P41227 235 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 GCGRP47871 477 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 AQP6Q13520 282 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 TRAM1Q15629 374 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 SYPL1Q16563 259 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CELF2-AS1Q8N7Q2 184 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ADOQ96SZ5 270 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CUEDC1Q9NWM3 386 aaPredicted RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 EXOSC1Q9Y3B2 195 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 SIPA1L1O43166 1804 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 MAP2K3P46734 347 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CARD18P57730 90 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 C17orf67Q0P5P2 114 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 RIMKLAQ8IXN7 391 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 OR8K3Q8NH51 312 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 MFSD8Q8NHS3 518 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 QRSL1Q9H0R6 528 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CSNK1G3Q9Y6M4 447 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CHMP24386 653 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 RBM34P42696 430 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ACTA2P62736 377 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ACTG2P63267 376 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 CBLBQ13191 982 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 OR2G6Q5TZ20 316 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 TMEM71Q6P5X7 295 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 SLC16A14Q7RTX9 510 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 NRMQ8IXM6 262 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 DNAJC22Q8N4W6 341 aa10.13□□□□□ -0.79
CLCN6-202ENST00000346436 DUS3LQ96G46 650 aaKnown RBP10.13□□□□□ -0.79
CLCN6-202ENST00000346436 ZC3HAV1LQ96H79 300 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms