RNA–Protein interactions for RNA: ENST00000345512.7

PTPRU-201, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRU, Length 4,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-201ENST00000345512 GCM2O75603 506 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 FGF9P31371 208 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 PRSS3P35030 304 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 GPLD1P80108 840 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 CDK5Q00535 292 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ARFRP1Q13795 201 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 SWI5Q1ZZU3 235 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ELP2Q6IA86 826 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ULK3Q6PHR2 472 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ALKAL2Q6UX46 152 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 NXF2Q9GZY0 626 aaKnown RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 NOX4Q9NPH5 578 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 DHDHQ9UQ10 334 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 CAMK2AQ9UQM7 478 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 SOX1O00570 391 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 SC5DO75845 299 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 GPR75O95800 540 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 S100A6P06703 90 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 SMCO1Q147U7 214 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 MPEG1Q2M385 716 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 PRAMEF8Q5VWM4 474 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 PRAMEF7Q5VXH5 474 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 LHX8Q68G74 356 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 LRFN4Q6PJG9 635 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 OR13C5Q8NGS8 318 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ZG16BQ96DA0 208 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 FCRL1Q96LA6 429 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 FAM83CQ9BQN1 747 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 FN3KQ9H479 309 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 TREM1Q9NP99 234 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ACTR10Q9NZ32 417 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 PLXNB2O15031 1838 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 A0A0B4J203 849 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 PLGP00747 810 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 S1PR1P21453 382 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 DLX5P56178 289 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF77Q15935 545 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 TRMT12Q53H54 448 aaKnown RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 KCTD18Q6PI47 426 aaPredicted RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 POGLUT1Q8NBL1 392 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 THRSPQ92748 146 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 DCLRE1CQ96SD1 692 aaKnown RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 NRIP3Q9NQ35 241 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 WASH6PQ9NQA3 447 aa14.42□□□□□ -0.1
PTPRU-201ENST00000345512 MBNL1Q9NR56 388 aaKnown RBP14.42□□□□□ -0.1
PTPRU-201ENST00000345512 RGPD3A6NKT7 1758 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 RGPD4Q7Z3J3 1758 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 A0A1B0GWA3 101 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 NARSO43776 548 aaKnown RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 AMY2AP04746 511 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR2T7P0C7T2 308 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR8G3PP0DMU2 310 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 NPR2P20594 1047 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR3A2P47893 321 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 HCCSP53701 268 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 P2RX3P56373 397 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 DPTQ07507 201 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 BTN1A1Q13410 526 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 NIPAL3Q6P499 406 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR2T27Q8NH04 317 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 DHRS1Q96LJ7 313 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 MFFQ9GZY8 342 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 SLC38A1Q9H2H9 487 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 MIXL1Q9H2W2 232 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 SLC39A1Q9NY26 324 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 MYEF2Q9P2K5 600 aaKnown RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 RLFQ13129 1914 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 LSM11P83369 360 aaKnown RBP eCLIP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 TMEM52BQ4KMG9 183 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 ALG10Q5BKT4 473 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 UBE2NLQ5JXB2 153 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR4D11Q8NGI4 311 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 ZFPM2Q8WW38 1151 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 UCN3Q969E3 161 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 TRMT61AQ96FX7 289 aaKnown RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 NMNAT3Q96T66 252 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 NRTNQ99748 197 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 GPR174Q9BXC1 333 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF436Q9C0F3 470 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 SPHK1Q9NYA1 384 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 PRODH2Q9UF12 536 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 KCND3Q9UK17 655 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 CKAP5Q14008 2032 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 SIP14410 1827 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 DISC1C4P0D8 188 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 F5H5P2 479 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 TEX46H3BTG2 121 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 PEX12O00623 359 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 KLF8O95600 359 aaPredicted RBP14.41□□□□□ -0.1
PTPRU-201ENST00000345512 SEMG1P04279 462 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 GP1BBP13224 206 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 PRPS1P60891 318 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 TMEM215Q68D42 235 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 ZNF584Q8IVC4 421 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 FOXRED2Q8IWF2 684 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 ARL14Q8N4G2 192 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 OR4Q3Q8NH05 313 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 PCM1Q15154 2024 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 A0A1W2PPL8 197 aa14.41□□□□□ -0.1
PTPRU-201ENST00000345512 B8ZZF3 427 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms