RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 ZNF419Q96HQ0 510 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 C1QTNF3Q9BXJ4 246 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 CALHM2Q9HA72 323 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 C19orf53Q9UNZ5 99 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 GPR52Q9Y2T5 361 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 COL6A6A6NMZ7 2263 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 LIPKQ5VXJ0 399 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 GATAD2BQ8WXI9 593 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 GUCD1Q96NT3 240 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 ACTR6Q9GZN1 396 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 MEGF11A6BM72 1044 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 DPPA5A6NC42 116 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 FAM172BPA6NC97 362 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 NOS1APO75052 506 aaPredicted RBP15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 CSN2P05814 226 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 BTG2P78543 158 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 GFRALQ6UXV0 394 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 IGFN1Q86VF2 1251 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 PPP1R35Q8TAP8 253 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 MZB1Q8WU39 189 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 SMURF1Q9HCE7 757 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 P4HTMQ9NXG6 502 aa15.2■□□□□ 0.02
SMARCA4-201ENST00000344626 CACNA1CQ13936 2221 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 CBFA2T3O75081 653 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 FTH1P19P0C7X4 201 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 CCL4P13236 92 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 ABI3BPQ7Z7G0 1075 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 OR1J2Q8NGS2 313 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 GPR78Q96P69 363 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 RAB9BQ9NP90 201 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 YARS2Q9Y2Z4 477 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 F5H5K5 113 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 GALR2O43603 387 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 RSU1Q15404 277 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 CCDC92Q53HC0 331 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 HBMQ6B0K9 141 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 SDR9C7Q8NEX9 313 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 SCGB2B2Q4G0G5 96 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 OR2A1Q8NGT9 310 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 HTRA1Q92743 480 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 TMEM184BQ9Y519 407 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 OR2W5A6NFC9 320 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 C12orf71A8MTZ7 269 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 KLK8O60259 260 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 ITGB2P05107 769 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 STSP08842 583 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 ID4P47928 161 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 MCCD1P59942 119 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 MS4A2Q01362 244 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 KEAP1Q14145 624 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 OGFRL1Q5TC84 451 aaPredicted RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 YRDCQ86U90 279 aaKnown RBP15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 OR5T2Q8NGG2 359 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 ZNF566Q969W8 418 aa15.19■□□□□ 0.02
SMARCA4-201ENST00000344626 IGHV5-51A0A0C4DH38 117 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ISPDA4D126 451 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC16A7O60669 478 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 PLATP00750 562 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 IL2RAP01589 272 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 DND1Q8IYX4 353 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 NT5CQ8TCD5 201 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 MGLLQ99685 303 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 BARD1Q99728 777 aaKnown RBP15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 TMEM38AQ9H6F2 299 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ERVK-18Q9QC07 812 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 CMAHPQ9Y471 501 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 FOLR1P15328 257 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 PAX7P23759 505 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC10A1Q14973 349 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 NADK2Q4G0N4 442 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 PAQR7Q86WK9 346 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 CYB561A3Q8NBI2 242 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 B3GNT7Q8NFL0 401 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 KCNIP1Q9NZI2 227 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ADAM18Q9Y3Q7 739 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ZFHX2Q9C0A1 2572 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC35F4A4IF30 521 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 D6RAR5 112 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 FCGR2AP12318 317 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 CD22P20273 847 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 TRIM23P36406 574 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ARL6IP1Q15041 203 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 FRMPD2BQ6IN97 320 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 TMPRSS12Q86WS5 348 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 MED11Q9P086 117 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 PCDHB10Q9UN67 800 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 A0A1W2PPW3 197 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 A0A1W2PR48 441 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 B4GAT1O43505 415 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 VASH1Q7L8A9 365 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SNX29P2Q8IUI4 249 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 OR9K2Q8NGE7 335 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 ZMYND19Q96E35 227 aaPredicted RBP15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SAP130Q9H0E3 1048 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SLC6A20Q9NP91 592 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 CTSFQ9UBX1 484 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 SCP2D1Q9UJQ7 156 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 LTBP1Q14766 1721 aa15.18■□□□□ 0.02
SMARCA4-201ENST00000344626 FIGNL2A6NMB9 653 aa15.17■□□□□ 0.02
SMARCA4-201ENST00000344626 ROR2Q01974 943 aaKnown RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms