RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 NPBWR1P48145 328 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 H2BFSP57053 126 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 IRF8Q02556 426 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SIGLEC14Q08ET2 396 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TSPAN31Q12999 210 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CHIT1Q13231 466 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PDE7AQ13946 482 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 LINC00303Q3SY05 128 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GRHL2Q6ISB3 625 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PODNL1Q6PEZ8 512 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 NDUFAF7Q7L592 441 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 IQCHQ86VS3 1027 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SERPINA9Q86WD7 417 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ANGPTL5Q86XS5 388 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GTPBP8Q8N3Z3 284 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OR5D16Q8NGK9 328 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OR5M1Q8NGP8 315 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 THAP4Q8WY91 577 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TFGQ92734 400 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ECHDC3Q96DC8 303 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MALSU1Q96EH3 234 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PPP1R16AQ96I34 528 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PRRC1Q96M27 445 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 FCRL4Q96PJ5 515 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 WDR77Q9BQA1 342 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 C2orf88Q9BSF0 95 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 RIOK2Q9BVS4 552 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ADAM19Q9H013 955 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SMG9Q9H0W8 520 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MAGEH1Q9H213 219 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM185BQ9H7F4 350 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 KRCC1Q9NPI7 259 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 UQCC1Q9NVA1 299 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 FBXL4Q9UKA2 621 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MAP4K5Q9Y4K4 846 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 DOCK4Q8N1I0 1966 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CACNA1GO43497 2377 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 BAHCC1Q9P281 2608 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 A0A1B0GV90 55 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 A0A1B0GVC2 190 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 METTL21EPA6NDL7 271 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 A6NIN4 97 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ACOD1A6NK06 481 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ICOSLGO75144 302 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SH3BGRLO75368 114 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CSF1P09603 554 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MPC1LP0DKB6 136 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ACP5P13686 325 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TPT1P13693 172 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CR2P20023 1033 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ACHEP22303 614 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ITGA3P26006 1051 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 RBM34P42696 430 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GLP1RP43220 463 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PPT1P50897 306 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 OR10A3P58181 314 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SEMG2Q02383 582 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 CNTN1Q12860 1018 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 BIKQ13323 160 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 INSL4Q14641 139 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 C9orf152Q5JTZ5 239 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ZDHHC20Q5W0Z9 365 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 C18orf63Q68DL7 685 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 JMJD6Q6NYC1 403 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ACOT7LQ6ZUV0 252 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TMPRSS11FQ6ZWK6 438 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MON1AQ86VX9 555 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 BEST3Q8N1M1 668 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TTC16Q8NEE8 873 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ABHD4Q8TB40 342 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MRPS31Q92665 395 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TRIM43Q96BQ3 446 aaPredicted RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TAAR9Q96RI9 348 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ACBD6Q9BR61 282 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF649Q9BS31 505 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GGACTQ9BVM4 153 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 PINK1Q9BXM7 581 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SLC12A9Q9BXP2 914 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 DUSP22Q9NRW4 184 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 SEMA4GQ9NTN9 838 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TMEM30AQ9NV96 361 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 GDE1Q9NZC3 331 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 DHCR7Q9UBM7 475 aaKnown RBP7.54□□□□□ -1.2
ATG4A-201ENST00000343524 TNFSF18Q9UNG2 199 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 POMT1Q9Y6A1 747 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 MYO16Q9Y6X6 1858 aa7.54□□□□□ -1.2
ATG4A-201ENST00000343524 DAPL1A0PJW8 107 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 POM121BA6NF01 834 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 OR2AT4A6NND4 320 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SURF4O15260 269 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 PMS2P2O95744 297 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 IFNA17P01571 189 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 BCHEP06276 602 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ZNF44P15621 663 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 ACRV1P26436 265 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 PPP2R1BP30154 601 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 SDHAP31040 664 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 HMGCS2P54868 508 aa7.53□□□□□ -1.2
ATG4A-201ENST00000343524 EIF5AP63241 154 aaKnown RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms