RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 FAM69BQ5VUD6 431 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 ZBTB46Q86UZ6 589 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 SLC43A2Q8N370 569 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 DEPDC7Q96QD5 511 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 RACGAP1Q9H0H5 632 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 OR51E2Q9H255 320 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 WDR54Q9H977 334 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 EXOGQ9Y2C4 368 aaKnown RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 EXOSC1Q9Y3B2 195 aaKnown RBP18.26■□□□□ 0.51
RTN1-202ENST00000342503 PCDHGA3Q9Y5H0 932 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 BDP1A6H8Y1 2624 aa18.26■□□□□ 0.51
RTN1-202ENST00000342503 KMT2EQ8IZD2 1858 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 CCRL2O00421 344 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 NDUFB2O95178 105 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 SCG5P05408 212 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 KLK3P07288 261 aaPredicted RBP18.25■□□□□ 0.51
RTN1-202ENST00000342503 SLC1A3P43003 542 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 SLC26A5P58743 744 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 NIPAL3Q6P499 406 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 GID4Q8IVV7 300 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 OR4F15Q8NGB8 312 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 MR1Q95460 341 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 NACC2Q96BF6 587 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 TMEM43Q9BTV4 400 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 HCAR1Q9BXC0 346 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 ADAM19Q9H013 955 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 CHCHD3Q9NX63 227 aaKnown RBP18.25■□□□□ 0.51
RTN1-202ENST00000342503 SLC39A1Q9NY26 324 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 ZNF337Q9Y3M9 751 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 MPDZO75970 2070 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 RALGAPA1Q6GYQ0 2036 aa18.25■□□□□ 0.51
RTN1-202ENST00000342503 KIF26BQ2KJY2 2108 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 TMEM200CA6NKL6 621 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 WWP2O00308 870 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 CLPXO76031 633 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 CYC1P08574 325 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 HK1P19367 917 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 ENDOUP21128 410 aaKnown RBP18.24■□□□□ 0.51
RTN1-202ENST00000342503 ITPKBP27987 946 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 TACR3P29371 465 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 EFR3AQ14156 821 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 TOMM34Q15785 309 aaPredicted RBP18.24■□□□□ 0.51
RTN1-202ENST00000342503 ZNF362Q5T0B9 420 aaPredicted RBP18.24■□□□□ 0.51
RTN1-202ENST00000342503 C19orf48Q6RUI8 117 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 MEPCEQ7L2J0 689 aaKnown RBP18.24■□□□□ 0.51
RTN1-202ENST00000342503 ATCAYQ86WG3 371 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 OR5M3Q8NGP4 307 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 DYNC2LI1Q8TCX1 351 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 LRFN5Q96NI6 719 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 ULBP3Q9BZM4 244 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 NXT1Q9UKK6 140 aaKnown RBP18.24■□□□□ 0.51
RTN1-202ENST00000342503 PCNX3Q9H6A9 2034 aa18.24■□□□□ 0.51
RTN1-202ENST00000342503 LOC100506127A0A0U1RQW1 187 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 RIIAD1A6NNX1 92 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 PRR23D1E9PI22 279 aaPredicted RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 NADKO95544 446 aaPredicted RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 PRR23D2P0DMB1 279 aaPredicted RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 SOX3P41225 446 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 FBXW4P57775 412 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 C1DQ13901 141 aaKnown RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 FAM198BQ6UWH4 519 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 IGFN1Q86VF2 1251 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 OR5W2Q8NH69 310 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 PTP4A1Q93096 173 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 ZHX1-C8orf76Q96EF9 292 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 CHCHD6Q9BRQ6 235 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 C12orf10Q9HB07 376 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 TEX51A0A1B0GUA7 166 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 ZC3H12DA2A288 527 aaKnown RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 HTR3EA5X5Y0 456 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 MCIDASD6RGH6 385 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 ADAM10O14672 748 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 IGF2P01344 180 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 LIMS3P0CW19 117 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 LIMS4P0CW20 117 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 PEPDP12955 493 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 CCKBRP32239 447 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 UGT2B10P36537 528 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 EGR4Q05215 589 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 MLLT11Q13015 90 aaPredicted RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 ITGADQ13349 1161 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 CBFBQ13951 182 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 GXYLT1Q4G148 440 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 ARHGAP11AQ6P4F7 1023 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 SLC37A3Q8NCC5 494 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 OR5L2Q8NGL0 311 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 OR8K3Q8NH51 312 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 ERMAPQ96PL5 475 aaPredicted RBP18.23■□□□□ 0.51
RTN1-202ENST00000342503 CHRNA9Q9UGM1 479 aa18.23■□□□□ 0.51
RTN1-202ENST00000342503 FRYLO94915 3013 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 TMEM129A0AVI4 362 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 B4E171 279 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 ZFAND5O76080 213 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 NUDT14O95848 222 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 ZNF3P17036 446 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 PGCP20142 388 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 NOS3P29474 1203 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 TSPAN7P41732 249 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 ENTPD1P49961 510 aa18.22■□□□□ 0.51
RTN1-202ENST00000342503 P2RX1P51575 399 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms