RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 TMEM150CB9EJG8 249 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 GNRH1P01148 92 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 CA3P07451 260 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 MAGEB1P43366 347 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 OR3A2P47893 321 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 GRK1Q15835 563 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ESCO2Q56NI9 601 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 OR5M10Q6IEU7 315 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM64Q6YI46 380 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF550Q7Z398 422 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 OR4C15Q8NGM1 316 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 OR9A4Q8NGU2 314 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 CCDC107Q8WV48 283 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 DVL3Q92997 716 aaPredicted RBP11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 MAP6Q96JE9 813 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 DPYSL5Q9BPU6 564 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 COPZ2Q9P299 210 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC23A1Q9UHI7 598 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 IGHA2P01877 340 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 AKR1C4P17516 323 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 IGFALSP35858 605 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 S100A10P60903 97 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TRAM1Q15629 374 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 FXNQ16595 210 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TCTE1Q5JU00 501 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 QSOX2Q6ZRP7 698 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ADGRF3Q8IZF5 1079 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 FBXL6Q8N531 539 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 FRMD1Q8N878 549 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 DHRS1Q96LJ7 313 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 SEMA4CQ9C0C4 833 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 METTL8Q9H825 291 aaKnown RBP11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TRIM64A6NGJ6 449 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 LIMS3P0CW19 117 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 LIMS4P0CW20 117 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF79Q15937 498 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC48A1Q6P1K1 146 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 SEC22AQ96IW7 307 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ZFYVE21Q9BQ24 234 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 WFDC6Q9BQY6 131 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 ARHGAP9Q9BRR9 750 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TAPBPLQ9BX59 468 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 MFFQ9GZY8 342 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 FBXL4Q9UKA2 621 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 V9GY05 133 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 SCN2AQ99250 2005 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 TRPM6Q9BX84 2022 aa11.54□□□□□ -0.56
SNRNP48-201ENST00000342415 H0Y8X5 98 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 GCM2O75603 506 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OPN1LWP04000 364 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PSMB1P20618 241 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 AQP2P41181 271 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RPL35P42766 123 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RFX2P48378 723 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SIRPAP78324 504 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TPBGQ13641 420 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SWI5Q1ZZU3 235 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RPL13AP3Q6NVV1 102 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 CFAP77Q6ZQR2 320 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 CD163Q86VB7 1156 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PDZD9Q8IXQ8 264 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SIRT6Q8N6T7 355 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OR7G2Q8NG99 324 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PATE1Q8WXA2 126 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TBC1D20Q96BZ9 403 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 CPNE2Q96FN4 548 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 WDR92Q96MX6 357 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TSSK2Q96PF2 358 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 APOOQ9BUR5 198 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TMEM168Q9H0V1 697 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 C6orf106Q9H6K1 298 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 AUNIPQ9H7T9 357 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 NIPAL2Q9H841 368 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 IGLV3-16A0A075B6K0 115 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 DISC1C4P0D8 188 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ANXA7P20073 488 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 MAPK3P27361 379 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 MAT1AQ00266 395 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 RPE65Q16518 533 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 METTL11BQ5VVY1 283 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 C1orf94Q6P1W5 598 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ZCCHC12Q6PEW1 402 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 NDUFAF7Q7L592 441 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 DUSP19Q8WTR2 217 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 MS4A6EQ96DS6 147 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 TSNAXQ99598 290 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ELF4Q99607 663 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 MRTO4Q9UKD2 239 aaKnown RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ERVK-19Q9WJR5 959 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ASB4Q9Y574 426 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 ZNF705EA8MWA4 302 aaPredicted RBP11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 PSMA3P25788 255 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 REEP5Q00765 189 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 OPCMLQ14982 345 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 SLC25A24Q6NUK1 477 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 CREB3L2Q70SY1 520 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 GPR155Q7Z3F1 870 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 GPAT4Q86UL3 456 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 UPRTQ96BW1 309 aa11.53□□□□□ -0.56
SNRNP48-201ENST00000342415 DERL3Q96Q80 235 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms