RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 OR2A2Q6IF42 318 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 C8orf82Q6P1X6 216 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 HACD2Q6Y1H2 254 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 ARPINQ7Z6K5 226 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 PATL1Q86TB9 770 aaKnown RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SLC15A3Q8IY34 581 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 BHLHE22Q8NFJ8 381 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SLC25A43Q8WUT9 341 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 ADAM19Q9H013 955 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 CHST11Q9NPF2 352 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 TIGARQ9NQ88 270 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 SPIN1Q9Y657 262 aaPredicted RBP13.66□□□□□ -0.22
UBE3B-201ENST00000340074 PKDREJQ9NTG1 2253 aa13.66□□□□□ -0.22
UBE3B-201ENST00000340074 DCHS2Q6V1P9 2916 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 TMEM72A0PK05 275 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 FAM220BPB1ANY3 271 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 IL18BPO95998 194 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 TFPIP10646 304 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 FCGR2AP12318 317 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 CRYBA2P53672 197 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 ERICH5Q6P6B1 374 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 CCDC80Q76M96 950 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 OR2T12Q8NG77 320 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 SLC26A7Q8TE54 656 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 ROBO4Q8WZ75 1007 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 CPNE4Q96A23 557 aaPredicted RBP13.65□□□□□ -0.22
UBE3B-201ENST00000340074 TAMM41Q96BW9 452 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 DNAJA3Q96EY1 480 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 ARL5BQ96KC2 179 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 WFDC6Q9BQY6 131 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 SFXN3Q9BWM7 321 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 OR11A1Q9GZK7 315 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 GMPR2Q9P2T1 348 aaKnown RBP13.65□□□□□ -0.22
UBE3B-201ENST00000340074 SLC13A4Q9UKG4 626 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 PRDM4Q9UKN5 801 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 CENPEQ02224 2701 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 FREM1Q5H8C1 2179 aa13.65□□□□□ -0.22
UBE3B-201ENST00000340074 A0A1W2PNV4 684 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 NME4O00746 187 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 TNFSF13O75888 250 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CXCR1P25024 350 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 DIO1P49895 249 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 SLC7A2P52569 658 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 RGS8P57771 180 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 RAC3P60763 192 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 VEZF1Q14119 521 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ZNF239Q16600 458 aaKnown RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CNEP1R1Q8N9A8 125 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CCDC197Q8NCU1 140 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 GPR32P1Q8NGA4 272 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 PRR14Q9BWN1 585 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 NPDC1Q9NQX5 325 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ARL8BQ9NVJ2 186 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 KLHL28Q9NXS3 571 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 AP3M1Q9Y2T2 418 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CACNA1DQ01668 2161 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 IGHV3-15A0A0B4J1V0 119 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 EEF1E1-BLOC1S5C9J1V9 151 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 M0R3H8 397 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 EEF1E1O43324 174 aaKnown RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ZNF208O43345 1280 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 LGI1O95970 557 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CRHP06850 196 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CD247P20963 164 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 FKBP2P26885 142 aaKnown RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 HTR2AP28223 471 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 KIR2DL2P43627 348 aaPredicted RBP13.64□□□□□ -0.23
UBE3B-201ENST00000340074 KCNJ5P48544 419 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ASCL1P50553 236 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 SIRPAP78324 504 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 LIPEQ05469 1076 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 BNIP2Q12982 314 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 MYBPHQ13203 477 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 GUSBP1Q15486 140 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 FAM91A1Q658Y4 838 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ZNF787Q6DD87 383 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 VWA1Q6PCB0 445 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 TMPPEQ6ZT21 453 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 MICU2Q8IYU8 434 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 FITM2Q8N6M3 262 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 LSMEM1Q8N8F7 131 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 OR52E4Q8NGH9 312 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 C3orf49Q96BT1 292 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 DDIT4LQ96D03 193 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ARHGDIGQ99819 225 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 TAGLN3Q9UI15 199 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 CLEC4AQ9UMR7 237 aa13.64□□□□□ -0.23
UBE3B-201ENST00000340074 ELOVL7A1L3X0 281 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ZC3H12DA2A288 527 aaKnown RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 SULT2B1O00204 365 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 SYT5O00445 386 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 TPST2O60704 377 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 PLGP00747 810 aaPredicted RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 FESP07332 822 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 C8BP07358 591 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 KLK2P20151 261 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 ENPP1P22413 925 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 CLK1P49759 484 aaKnown RBP13.63□□□□□ -0.23
UBE3B-201ENST00000340074 MAP2K6P52564 334 aa13.63□□□□□ -0.23
UBE3B-201ENST00000340074 PSME3P61289 254 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms