RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 MAN2C1Q9NTJ4 1040 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 OXSMQ9NWU1 459 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 FBXL4Q9UKA2 621 aa3.09□□□□□ -1.92
CSMD3-202ENST00000339701 RIF1Q5UIP0 2472 aaKnown RBP3.09□□□□□ -1.92
CSMD3-202ENST00000339701 KIR2DS5A0A0G2JLQ3 304 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 A0A0G2JNG1 304 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ELOA3DA6NLF2 546 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 H3BMQ9 156 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 KIR2DS3K7RE56 304 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF623O75123 536 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 UBL3O95164 117 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SERPINA5P05154 406 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A6P0DMU7 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A5P0DMU8 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A7P0DMV0 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A8P0DMV1 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A9P0DMV2 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HIST1H1BP16401 226 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ENGP17813 658 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SPI1P17947 270 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PMCHP20382 165 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HIST1H1TP22492 207 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TACR1P25103 407 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MIPP30301 263 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC19A1P41440 591 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC11A1P49279 550 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NUMBP49757 651 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NPY4RP50391 375 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF91Q05481 1191 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 POU6F1Q14863 301 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 KIR2DS5Q14953 304 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ELOA3BQ3SY89 546 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A2Q5DJT8 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A1Q5HYN5 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM69Q5SWH9 247 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 AGAP6Q5VW22 663 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAET1LQ5VY80 246 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 KCTD11Q693B1 232 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 VWA5B2Q8N398 1253 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BCORP1Q8N888 145 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ELOA3Q8NG57 546 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR4Q3Q8NH05 313 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CT45A3Q8NHU0 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF431Q8TF32 576 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C16orf78Q8WTQ4 265 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GCDHQ92947 438 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TRNAU1APQ9NX07 287 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GAR1Q9NY12 217 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MYEF2Q9P2K5 600 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 THSD7BQ9C0I4 1608 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 A0A087WUU8 490 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C1orf226A1L170 272 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FAM159BA6NKW6 160 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MFSD11O43934 449 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR2F2O95006 317 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 C4BPAP04003 597 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CDK1P06493 297 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CKMT2P17540 419 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR2F1Q13607 317 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DLK2Q6UY11 383 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LAS2Q8IYD9 372 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 IL17RCQ8NAC3 791 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR13D1Q8NGV5 346 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DYNC2LI1Q8TCX1 351 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ST8SIA4Q92187 359 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DAZAP1Q96EP5 407 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR8D2Q9GZM6 311 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF350Q9GZX5 532 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PLCXD1Q9NUJ7 323 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 AIG1Q9NVV5 245 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ZNF586Q9NXT0 402 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NINJ2Q9NZG7 142 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 GJD2Q9UKL4 321 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 IQCMA0A1B0GVH7 501 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MDFIC2A0A1B0GVS7 189 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 A6NHS1 94 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 MANBAO00462 879 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 NSA2O95478 260 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RD3LP0DJH9 198 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ACP2P11117 423 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TACR2P21452 398 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 HTR2CP28335 458 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SOX18P35713 384 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BDKRB1P46663 353 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CHRNEQ04844 493 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 RAB33AQ14088 237 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 EXT1Q16394 746 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 FAM209BQ5JX69 171 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 TMEM268Q5VZI3 342 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 LCN8Q6JVE9 175 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 BLOC1S3Q6QNY0 202 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 ANKRD13BQ86YJ7 626 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CMASQ8NFW8 434 aaPredicted RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR1N1Q8NGS0 311 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 OR14L1PQ8NHC6 308 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 CD300LFQ8TDQ1 290 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 SLC35G5Q96KT7 338 aa3.08□□□□□ -1.92
CSMD3-202ENST00000339701 PURBQ96QR8 312 aaKnown RBP3.08□□□□□ -1.92
CSMD3-202ENST00000339701 DCLRE1CQ96SD1 692 aaKnown RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms