RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 CTBP2P56545 445 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 FBXW4P57775 412 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 RNF4P78317 190 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DCDP81605 110 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 ACY1Q03154 408 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PLCXD2Q0VAA5 305 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DYNC1I2Q13409 638 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SQSTM1Q13501 440 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DCTN2Q13561 401 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PEAR1Q5VY43 1037 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 MEDAGQ5VYS4 303 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 C19orf48Q6RUI8 117 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF367Q7RTV3 350 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF550Q7Z398 422 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 ANKRD37Q7Z713 158 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PPP1R3BQ86XI6 285 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PHC2Q8IXK0 858 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CDK20Q8IZL9 346 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 RFLNBQ8N5W9 214 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PLPP5Q8NEB5 264 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM71CQ8NEG0 241 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SDR9C7Q8NEX9 313 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PROKR2Q8NFJ6 384 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 TOR1AIP2Q8NFQ8 470 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 NLGN4YQ8NFZ3 816 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 MOSPD2Q8NHP6 518 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DUSP19Q8WTR2 217 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 PMM1Q92871 262 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 KTI12Q96EK9 354 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 GFM1Q96RP9 751 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SECISBP2Q96T21 854 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SPSB2Q99619 263 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 WDR77Q9BQA1 342 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 GALNT9Q9HCQ5 603 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 KLHL1Q9NR64 748 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 OSGIN1Q9UJX0 560 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 SPIN1Q9Y657 262 aaPredicted RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 DCHS1Q96JQ0 3298 aa6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 CNOT1A5YKK6 2376 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 URB1O60287 2271 aaKnown RBP6.76□□□□□ -1.33
SRFBP1-201ENST00000339397 FAM171A2A8MVW0 826 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MEN1O00255 615 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ADAM10O14672 748 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TOX3O15405 576 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF264O43296 627 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 DYRK3O43781 588 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 CDC40O60508 579 aaKnown RBP eCLIP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NUDT14O95848 222 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ITPKBP27987 946 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 IL12BP29460 328 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ATP6V1E1P36543 226 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 COPZ1P61923 177 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MXD1Q05195 221 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ITGADQ13349 1161 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 INPP5JQ15735 1006 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 OTPQ5XKR4 325 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 HLA-DQA1Q5Y7H0 255 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC23A3Q6PIS1 610 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 CLDN22Q8N7P3 220 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TMEM99Q8N816 258 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SYT14Q8NB59 555 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF485Q8NCK3 441 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NFAM1Q8NET5 270 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 OR52E2Q8NGJ4 325 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 KISS1RQ969F8 398 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ERMAPQ96PL5 475 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 PELOQ9BRX2 385 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 IER2Q9BTL4 223 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 CDADC1Q9BWV3 514 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MARCH7Q9H992 704 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TOR4AQ9NXH8 423 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 COPS7AQ9UBW8 275 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 IER3IP1Q9Y5U9 82 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RIF1Q5UIP0 2472 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 IGLV3-12A0A075B6K2 115 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 D6RAR5 112 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MYL12BO14950 172 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NDUFB5O43674 189 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ALOX12BO75342 701 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 F13BP05160 661 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ANKRD34CP0C6C1 535 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TCEA1P23193 301 aaKnown RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TACR3P29371 465 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 AQP2P41181 271 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SERPINB10P48595 397 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ERVK-25P63136 954 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 IFITM3Q01628 133 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RAB40BQ12829 278 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 MOGQ16653 247 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NXNL2Q5VZ03 156 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 NIPAL3Q6P499 406 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 SLC29A4Q7RTT9 530 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 OVCH1Q7RTY7 1134 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ATG4DQ86TL0 474 aaPredicted RBP6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 ZNF441Q8N8Z8 693 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 OR52L1Q8NGH7 329 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 OR14A16Q8NHC5 309 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TP53INP1Q96A56 240 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 RASD2Q96D21 266 aa6.75□□□□□ -1.33
SRFBP1-201ENST00000339397 TSSK2Q96PF2 358 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms