RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 GAL3ST3Q96A11 431 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 FAM46AQ96IP4 442 aaKnown RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 TIMP4Q99727 224 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 TPSD1Q9BZJ3 242 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SDHAF2Q9NX18 166 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 POMT2Q9UKY4 750 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 PPIEQ9UNP9 301 aaKnown RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF780BQ9Y6R6 833 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 COL6A3P12111 3177 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SLC9B1P1A6NJY1 282 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 SOX1O00570 391 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 P2RX6O15547 441 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 NTN1O95631 604 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 IGLV3-19P01714 112 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 HPXP02790 462 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 IFNA16P05015 189 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 NAT2P11245 290 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 PVRP15151 417 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 PPP2R1BP30154 601 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 IFNGR2P38484 337 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 RABIFP47224 123 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 DGCR2P98153 550 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 LTB4RQ15722 352 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 FCRL6Q6DN72 434 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 FIGLAQ6QHK4 219 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 KANSL1Q7Z3B3 1105 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF761Q86XN6 746 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 OR56B4Q8NH76 319 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 COL26A1Q96A83 441 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 DACT3Q96B18 629 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 METTL17Q9H7H0 456 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 ZC4H2Q9NQZ6 224 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 BABAM2Q9NXR7 383 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 WSB2Q9NYS7 404 aaPredicted RBP17.35■□□□□ 0.37
PSPC1-201ENST00000338910 HCN3Q9P1Z3 774 aa17.35■□□□□ 0.37
PSPC1-201ENST00000338910 OMPP47874 163 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 KHKP50053 298 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 MMP15P51511 669 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 CTAG1AP78358 180 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 ZNF681Q96N22 645 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 MED17Q9NVC6 651 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 CPNE7Q9UBL6 633 aa17.34■□□□□ 0.37
PSPC1-201ENST00000338910 SOCS6O14544 535 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 CHRM4P08173 479 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 ANKRD34CP0C6C1 535 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 F8A1P23610 371 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 BUD31P41223 144 aaPredicted RBP17.33■□□□□ 0.37
PSPC1-201ENST00000338910 C1orf61Q13536 156 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 OPCMLQ14982 345 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 RNASE12Q5GAN4 147 aaKnown RBP17.33■□□□□ 0.37
PSPC1-201ENST00000338910 TMEM64Q6YI46 380 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 OR4N5Q8IXE1 308 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 TMEFF1Q8IYR6 380 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 OR6M1Q8NGM8 313 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 HAVCR2Q8TDQ0 301 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 ELP4Q96EB1 424 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 ART5Q96L15 291 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 QRSL1Q9H0R6 528 aaKnown RBP17.33■□□□□ 0.37
PSPC1-201ENST00000338910 NLGN3Q9NZ94 848 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 CSNK1G3Q9Y6M4 447 aa17.33■□□□□ 0.37
PSPC1-201ENST00000338910 TDRD6O60522 2096 aaKnown RBP17.33■□□□□ 0.37
PSPC1-201ENST00000338910 UBL3O95164 117 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 NUP62P37198 522 aaPredicted RBP17.33■□□□□ 0.36
PSPC1-201ENST00000338910 CCR5P51681 352 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 FUT5Q11128 374 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 ZNF273Q14593 569 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 TPRA1Q86W33 373 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 ZNF527Q8NB42 609 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 TSTD1Q8NFU3 115 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 OR52H1Q8NGJ2 320 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 BBS10Q8TAM1 723 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 OSTF1Q92882 214 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 AHCYL2Q96HN2 611 aaKnown RBP17.33■□□□□ 0.36
PSPC1-201ENST00000338910 C7orf50Q9BRJ6 194 aaKnown RBP17.33■□□□□ 0.36
PSPC1-201ENST00000338910 SPATA5L1Q9BVQ7 753 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 ACTR6Q9GZN1 396 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 BCL2L10Q9HD36 194 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 IL20Q9NYY1 176 aa17.33■□□□□ 0.36
PSPC1-201ENST00000338910 A0A1W2PRG6 482 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 TNFSF14O43557 240 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 SLC2A10O95528 541 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 PRKACAP17612 351 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 LSSP48449 732 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 BLVRAP53004 296 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 TAS2R41P59536 307 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 PRR5P85299 388 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 SLC25A35Q3KQZ1 300 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 TAF8Q7Z7C8 310 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 SHISA5Q8N114 240 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 NUP43Q8NFH3 380 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 OR51G2Q8NGK0 314 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 NT5CQ8TCD5 201 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 GPBAR1Q8TDU6 330 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 FBXW5Q969U6 566 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 TM4SF19Q96DZ7 209 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 SPRTNQ9H040 489 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-201ENST00000338910 HINT3Q9NQE9 182 aaKnown RBP17.32■□□□□ 0.36
PSPC1-201ENST00000338910 ZNF275Q9NSD4 429 aaPredicted RBP17.32■□□□□ 0.36
PSPC1-201ENST00000338910 TMEM74BQ9NUR3 256 aa17.32■□□□□ 0.36
PSPC1-201ENST00000338910 EMC3Q9P0I2 261 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms