RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 TMED7-TICAM2A0A0A6YYA0 188 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ZC3H12DA2A288 527 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF716A6NP11 495 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 HDAC3O15379 428 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 NDUFS7O75251 213 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 AGR2O95994 175 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 GKN3PP0CG01 181 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 IMPDH2P12268 514 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 CDKN1AP38936 164 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 APOBEC1P41238 236 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 KHKP50053 298 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 MAGOHP61326 146 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 BSPH1Q075Z2 132 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 KRTAP21-3Q3LHN1 58 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 PRSS57Q6UWY2 283 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 Q6ZT83 130 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 GALNT5Q7Z7M9 940 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 VRK2Q86Y07 508 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ARFGAP2Q8N6H7 521 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 KBTBD8Q8NFY9 601 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ARL8AQ96BM9 186 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 OR52B2Q96RD2 323 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 GSX2Q9BZM3 304 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 OR10A4Q9H209 315 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 GP6Q9HCN6 339 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF701Q9NV72 531 aaPredicted RBP11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 THAP1Q9NVV9 213 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 NPAP1Q9NZP6 1156 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 OSGIN1Q9UJX0 560 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 SLC35A3Q9Y2D2 325 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 TMED7Q9Y3B3 224 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 RNF115Q9Y4L5 304 aa11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 FN1P02751 2386 aaKnown RBP11.81□□□□□ -0.52
NUDCD3-201ENST00000338427 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 CSPG4Q6UVK1 2322 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 AGAP5A6NIR3 686 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF724A8MTY0 619 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 CD8AP01732 235 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 CD3EP07766 207 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 DANCRP0C864 163 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 NR2F1P10589 423 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 ETFAP13804 333 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 PCSK6P29122 969 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 TACR3P29371 465 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 MVDP53602 400 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 ATP5J2P56134 94 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 FAPQ12884 760 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 TNK1Q13470 666 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 P2RY6Q15077 328 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 C9orf135Q5VTT2 229 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 ADAM5Q6NVV9 412 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 DNAJC14Q6Y2X3 702 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 LRRC74BQ6ZQY2 392 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 GRINAQ7Z429 371 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 UBE2J2Q8N2K1 259 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 CLIP4Q8N3C7 705 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF433Q8N7K0 673 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 OR52E4Q8NGH9 312 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 OR9I1Q8NGQ6 314 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 AURKBQ96GD4 344 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 TRNT1Q96Q11 434 aaKnown RBP11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 BDH2Q9BUT1 245 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 MANSC1Q9H8J5 431 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 MTHFD2LQ9H903 347 aaPredicted RBP11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 POLE3Q9NRF9 147 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 CHRNA9Q9UGM1 479 aa11.8□□□□□ -0.52
NUDCD3-201ENST00000338427 SLC22A3O75751 556 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 SNUPNO95149 360 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 HEXAP06865 529 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 GUSBP08236 651 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 PRG2P13727 222 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 IL7RP16871 459 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 CSNK2A1P68400 391 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 BNIP2Q12982 314 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 PPA1Q15181 289 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 PGGHGQ32M88 737 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 RPS26P11Q5JNZ5 115 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 MRPL2Q5T653 305 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 OR52N5Q8NH56 324 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 SMAP2Q8WU79 429 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 VPS33AQ96AX1 596 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 RSPO3Q9BXY4 272 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 TMBIM4Q9HC24 238 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 NOSIPQ9Y314 301 aaKnown RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 CHST2Q9Y4C5 530 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 MAGED1Q9Y5V3 778 aaPredicted RBP11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 ABCA2Q9BZC7 2435 aa11.79□□□□□ -0.52
NUDCD3-201ENST00000338427 IGKV3D-15A0A087WSY6 115 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 SHISA9B4DS77 424 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 OVOL3O00110 214 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 RFXANKO14593 260 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 RAD51DO75771 328 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 PGM3O95394 542 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 PMS2P2O95744 297 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 NUDT7P0C024 238 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 PAX1P15863 534 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ACAA2P42765 397 aaKnown RBP11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 CRATP43155 626 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 ZNF83P51522 516 aa11.78□□□□□ -0.52
NUDCD3-201ENST00000338427 DPY19L1Q2PZI1 675 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms