RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 GPR143P51810 404 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 NR0B1P51843 470 aaKnown RBP15.01□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF251Q9BRH9 671 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 MIXL1Q9H2W2 232 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TMEM231Q9H6L2 316 aa15.01□□□□□ -0.01
NPHP3-201ENST00000337331 TUBAL3A6NHL2 446 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 PRKXP51817 358 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 CCNJQ5T5M9 372 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 VASNQ6EMK4 673 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 OR2L8Q8NGY9 312 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 SLC41A3Q96GZ6 507 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ACTRT3Q9BYD9 372 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 METTL7AQ9H8H3 244 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 SLC6A13Q9NSD5 602 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 KLHL9Q9P2J3 617 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 TXNDC12O95881 172 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 CFIP05156 583 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ETV5P41161 510 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 CRYBB2P43320 205 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ARHGAP11AQ6P4F7 1023 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 KIAA0907Q7Z7F0 614 aaPredicted RBP15□□□□□ -0.01
NPHP3-201ENST00000337331 CBLN2Q8IUK8 224 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 SLC39A11Q8N1S5 342 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 LKAAEAR1Q8TD35 194 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 CMKLR1Q99788 373 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ORAI3Q9BRQ5 295 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 DPH1Q9BZG8 443 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 SLC2A4RGQ9NR83 387 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ATXN7L1Q9ULK2 861 aaPredicted RBP15□□□□□ -0.01
NPHP3-201ENST00000337331 MAFFQ9ULX9 164 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 NHSQ6T4R5 1651 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 TEX13DA0A0J9YY54 714 aaPredicted RBP15□□□□□ -0.01
NPHP3-201ENST00000337331 AGAP14A8MT82 685 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 RNF212Q495C1 297 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF529Q6P280 563 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 FIGLAQ6QHK4 219 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 RFLNAQ6ZTI6 216 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 GSKIPQ9P0R6 139 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 TMEM14AQ9Y6G1 99 aa15□□□□□ -0.01
NPHP3-201ENST00000337331 HHLA1C9JL84 531 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 OR7A17O14581 309 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 AHRP35869 848 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 S100A10P60903 97 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 FAHD1Q6P587 224 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 TTLL10Q6ZVT0 673 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 BVESQ8NE79 360 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 CASD1Q96PB1 797 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 GABARAPL3Q9BY60 117 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 CCDC85CA6NKD9 419 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 RBMS1P29558 406 aaKnown RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 PPT1P50897 306 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 FABP5Q01469 135 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ST3GAL2Q16842 350 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 SBSNQ6UWP8 590 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 C5orf46Q6UWT4 87 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 OR52I1Q8NGK6 324 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 YIPF5Q969M3 257 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ISG20Q96AZ6 181 aaKnown RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 GHITMQ9H3K2 345 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 CLEC4EQ9ULY5 219 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 TRBV4-1A0A0J9YWV2 114 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 GPR31O00270 319 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 AK1P00568 194 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 EGFP01133 1207 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ANXA7P20073 488 aaKnown RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 G0S2P27469 103 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ARRB1P49407 418 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 DGCR2P98153 550 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 FAM189A2Q15884 450 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 HTR3DQ70Z44 454 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 PARS2Q7L3T8 475 aaKnown RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 SCGB3A2Q96PL1 93 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 SLC22A12Q96S37 553 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF629Q9UEG4 869 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 EEF1E1-BLOC1S5C9J1V9 151 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF208O43345 1280 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 IGFBP6P24592 240 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ART1P52961 327 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 SLC14A2Q15849 920 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 TCEAL6Q6IPX3 200 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 CCDC71Q8IV32 467 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 OR11H4Q8NGC9 324 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 OR1J4Q8NGS1 313 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ST7LQ8TDW4 575 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 THAP3Q8WTV1 239 aaPredicted RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 CPEB1Q9BZB8 566 aaKnown RBP14.99□□□□□ -0.01
NPHP3-201ENST00000337331 ATG5Q9H1Y0 275 aa14.99□□□□□ -0.01
NPHP3-201ENST00000337331 KNTC1P50748 2209 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 OR5K4A6NMS3 321 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 TIMP2P16035 220 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 GIPRP48546 466 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 OR2B8PP59922 312 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 SLC6A19Q695T7 634 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 ZNF761Q86XN6 746 aaPredicted RBP14.98□□□□□ -0.01
NPHP3-201ENST00000337331 GKN2Q86XP6 184 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 OR9A2Q8NGT5 310 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 OR2L2Q8NH16 312 aa14.98□□□□□ -0.01
NPHP3-201ENST00000337331 CNN2Q99439 309 aaKnown RBP14.98□□□□□ -0.01
NPHP3-201ENST00000337331 POTEKPQ9BYX7 375 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms