RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 ABHD1Q96SE0 405 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 PHB2Q99623 299 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 IL21RQ9HBE5 538 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 ASB6Q9NWX5 421 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 HIF3AQ9Y2N7 669 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 SCN1AP35498 2009 aa12.36□□□□□ -0.43
COL2A1-201ENST00000337299 A0A0D9SG52 128 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 HEPACAM2A8MVW5 462 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 SGK494L7N484 410 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 GPR31O00270 319 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 CYBAP13498 195 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 F3P13726 295 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 DCTDP32321 178 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 RTP2Q5QGT7 225 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 SLC29A4Q7RTT9 530 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 GLB1L2Q8IW92 636 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 DUSP18Q8NEJ0 188 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 OR4D10Q8NGI6 311 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 OR13C2Q8NGS9 318 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 C5orf34Q96MH7 638 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF559Q9BR84 538 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 BTBD2Q9BX70 525 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 BRF2Q9HAW0 419 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 PLEKHA1Q9HB21 404 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 ACKR4Q9NPB9 350 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 UFSP2Q9NUQ7 469 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 YIPF1Q9Y548 306 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 PUS1Q9Y606 427 aaKnown RBP eCLIP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 URADA6NGE7 173 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 C11orf98E9PRG8 122 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 TSTD3H0UI37 97 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 AIPO00170 330 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 KLK8O60259 260 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 FURINP09958 794 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF823P16415 610 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 NKX6-1P78426 367 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 CRMP1Q14194 572 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 MAPK14Q16539 360 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 FAM209BQ5JX69 171 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 LRFN4Q6PJG9 635 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 TECPR1Q7Z6L1 1165 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 TMEM150AQ86TG1 271 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 HAVCR2Q8TDQ0 301 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF480Q8WV37 535 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 FOXRED1Q96CU9 486 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 RBM18Q96H35 190 aaKnown RBP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 EVA1AQ9H8M9 152 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 HRASLSQ9HDD0 168 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 KCNK6Q9Y257 313 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 IER3IP1Q9Y5U9 82 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 A8MVJ9 347 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 SOCS5O75159 536 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 WNT1P04628 370 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 CLDN2P57739 230 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 LTBQ06643 244 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 LMAN2Q12907 356 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 OR7A5Q15622 319 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 C7orf61Q8IZ16 206 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 L3MBTL4Q8NA19 623 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 OR5AK2Q8NH90 309 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 LCN9Q8WX39 176 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 FAM46BQ96A09 425 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 ELF5Q9UKW6 265 aaPredicted RBP12.35□□□□□ -0.43
COL2A1-201ENST00000337299 CLEC4EQ9ULY5 219 aa12.35□□□□□ -0.43
COL2A1-201ENST00000337299 A0A087WUU8 490 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ANTXRLA6NF34 631 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 SULT1C2O00338 296 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF208O43345 1280 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 LANCL1O43813 399 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 HPXP02790 462 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 S100PP25815 95 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 LIM2P55344 173 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ACVR1Q04771 509 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 RPE65Q16518 533 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 RHOUQ7L0Q8 258 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 CHST14Q8NCH0 376 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 OR2T4Q8NH00 348 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ZNF461Q8TAF7 563 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 STK35Q8TDR2 534 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ZFPM2Q8WW38 1151 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 MYLIPQ8WY64 445 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 LRIG1Q96JA1 1093 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 PTDSS2Q9BVG9 487 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 PIGMQ9H3S5 423 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ACSS1Q9NUB1 689 aaPredicted RBP12.34□□□□□ -0.43
COL2A1-201ENST00000337299 WASH3PC4AMC7 463 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 TRIM77I1YAP6 450 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 EMC8O43402 210 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 ETHE1O95571 254 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 CSF1P09603 554 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 IFNGR1P15260 489 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 CSF2RBP32927 897 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 RBMXP38159 391 aaKnown RBP12.34□□□□□ -0.43
COL2A1-201ENST00000337299 KCNJ5P48544 419 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 GPAT4Q86UL3 456 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 SLC35F2Q8IXU6 374 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 BPIFB2Q8N4F0 458 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 OR52H1Q8NGJ2 320 aa12.34□□□□□ -0.43
COL2A1-201ENST00000337299 RXFP3Q9NSD7 469 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms