RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 Q7L0L9 218 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 MRGPREQ86SM8 312 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 AKAP14Q86UN6 197 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ARHGEF39Q8N4T4 335 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 ZNF511Q8NB15 262 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 TEX12Q9BXU0 123 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 MRPS7Q9Y2R9 242 aaKnown RBP8.13□□□□□ -1.11
SNCA-201ENST00000336904 RNF215Q9Y6U7 377 aa8.13□□□□□ -1.11
SNCA-201ENST00000336904 COL4A2P08572 1712 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 FER1L5A0AVI2 2057 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 NCOR1O75376 2440 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 A0A087WV62 115 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 SAGE2PA6NJ88 616 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 RHPN2P1A8MT19 583 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 RNF13O43567 381 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 AKAP8O43823 692 aaKnown RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR2B3O76000 313 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 FCER2P06734 321 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 HPGDP15428 266 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 AQP2P41181 271 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 CASP3P42574 277 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR2B6P58173 313 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 TPBGQ13641 420 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 FHL1Q13642 323 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 PRTGQ2VWP7 1150 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 RSBN1Q5VWQ0 802 aaPredicted RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 KANSL1Q7Z3B3 1105 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 EGFL6Q8IUX8 553 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GJD3Q8N144 294 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 ZBTB8BQ8NAP8 495 aaPredicted RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR5W2Q8NH69 310 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 CAPSLQ8WWF8 208 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 HSD17B8Q92506 261 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GFM1Q96RP9 751 aaKnown RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 Q9N2J8 555 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 A0A0G2JMP0 313 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 A0A0X1KG70 313 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 FAM86C2PA6NEL3 165 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 CCDC182A6NF36 153 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 TVP23AA6NH52 213 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 C11orf98E9PRG8 122 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GTPBP1O00178 669 aaKnown RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 RAD1O60671 282 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 APOA1P02647 267 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 FOLR1P15328 257 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 MAP3K8P41279 467 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 PI4KAP42356 2102 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GPR3P46089 330 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 ARL4DP49703 201 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 COPZ1P61923 177 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 CFHR1Q03591 330 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 ZNF85Q03923 595 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 KCNJ8Q15842 424 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 DDI2Q5TDH0 399 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GARNL3Q5VVW2 1013 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 SYT13Q7L8C5 426 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 CEACAM19Q7Z692 300 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 SLC7A5P1Q8MH63 180 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 ARIH2OSQ8N7S6 290 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR4M2Q8NGB6 313 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR2I1PQ8NGU4 316 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 Q96M85 177 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 STACQ99469 402 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 WACQ9BTA9 647 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 SLC25A18Q9H1K4 315 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 ADGRL4Q9HBW9 690 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 PRDM6Q9NQX0 595 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 DDX28Q9NUL7 540 aaKnown RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 ACOXLQ9NUZ1 547 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GNG8Q9UK08 70 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 GSTK1Q9Y2Q3 226 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 EML5Q05BV3 1969 aa8.12□□□□□ -1.11
SNCA-201ENST00000336904 URB1O60287 2271 aaKnown RBP8.12□□□□□ -1.11
SNCA-201ENST00000336904 OR5K4A6NMS3 321 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CLDN4O14493 209 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CHP2O43745 196 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 LANCL1O43813 399 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SCO2O43819 266 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 CCNKO75909 580 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 HMGN1P05114 100 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 DRD5P21918 477 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ITPKBP27987 946 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 BLKP51451 505 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ARFIP1P53367 373 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 DEFA1P59665 94 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 DEFA3P59666 94 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 TDGQ13569 410 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 ELOCQ15369 112 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 LNX2Q8N448 690 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 IL17RDQ8NFM7 739 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 OR4D9Q8NGE8 314 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 BRIX1Q8TDN6 353 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 ATF6BQ99941 703 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 NUDT22Q9BRQ3 303 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 FKRPQ9H9S5 495 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SRA1Q9HD15 236 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 RPRD1BQ9NQG5 326 aaKnown RBP8.11□□□□□ -1.11
SNCA-201ENST00000336904 COPS3Q9UNS2 423 aa8.11□□□□□ -1.11
SNCA-201ENST00000336904 SATB2Q9UPW6 733 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms