RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PTP4A1Q93096 173 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 CRELD1Q96HD1 420 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 OR6C1Q96RD1 312 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 ABCB9Q9NP78 766 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 GMEB2Q9UKD1 530 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 IER3IP1Q9Y5U9 82 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 SIRT4Q9Y6E7 314 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 A0A1B0GVC2 190 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 A6NIN4 97 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 SNX4O95219 450 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 CRYBB2P43320 205 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 CCL7P80098 99 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 EFNB1P98172 346 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 TMEM201Q5SNT2 666 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 AADACL4Q5VUY2 407 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 LYSMD4Q5XG99 296 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 FAM199XQ6PEV8 388 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 USP43Q70EL4 1123 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 CDK20Q8IZL9 346 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 LSMEM1Q8N8F7 131 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 SLC37A3Q8NCC5 494 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 TRUB1Q8WWH5 349 aaKnown RBP11.55□□□□□ -0.56
LIMK1-201ENST00000336180 HMG20AQ9NP66 347 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 ATPIF1Q9UII2 106 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 EML5Q05BV3 1969 aa11.55□□□□□ -0.56
LIMK1-201ENST00000336180 A0A0B4J2E0 115 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 A0A1B0GX12 115 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SERINC4A6NH21 518 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ICMTO60725 284 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 GPANK1O95872 356 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SCG5P05408 212 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SDC2P34741 201 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SLC1A3P43003 542 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF846Q147U1 533 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 PHF19Q5T6S3 580 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 CD300LDQ6UXZ3 194 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 DCDC5Q6ZRR9 648 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 LAX1Q8IWV1 398 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ZSCAN1Q8NBB4 408 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 TOR1AIP2Q8NFQ8 470 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 OR13C5Q8NGS8 318 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 MOSPD2Q8NHP6 518 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ORAI1Q96D31 301 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 VN1R1Q9GZP7 353 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 TNFRSF10DQ9UBN6 386 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SIGLEC7Q9Y286 467 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ADAMTS9Q9P2N4 1935 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 DRD5P21918 477 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 PSMA1P25786 263 aaKnown RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ACVR1BP36896 505 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ATP12AP54707 1039 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SLC37A1P57057 533 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 B2MP61769 119 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 FABP5Q01469 135 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 HNRNPA0Q13151 305 aaKnown RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SF3B4Q15427 424 aaKnown RBP eCLIP11.54□□□□□ -0.562e-6■■■■■ 28.8
LIMK1-201ENST00000336180 TRIM16LQ309B1 348 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 BICRALQ6AI39 1079 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 TCEAL6Q6IPX3 200 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 LCN10Q6JVE6 187 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SSX6Q7RTT6 188 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF563Q8TA94 476 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 CEP76Q8TAP6 659 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 TCEAL3Q969E4 200 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 DIMT1Q9UNQ2 313 aaKnown RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 A0A087WV48 116 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 A0A1W2PQM1 296 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SHISA8B8ZZ34 492 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 HCRTR2O43614 444 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 UTS2O95399 124 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 PLGP00747 810 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 GLB1P16278 677 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 ARRB1P49407 418 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 HLA-BQ31612 363 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 OGFOD3Q6PK18 319 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 Q6ZNX1 250 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SYT9Q86SS6 491 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SLC22A16Q86VW1 577 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 C17orf82Q86X59 251 aaPredicted RBP11.54□□□□□ -0.56
LIMK1-201ENST00000336180 PLXDC1Q8IUK5 500 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 MOGAT1Q96PD6 335 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 NMNAT3Q96T66 252 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 NPAS1Q99742 590 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 MCCC2Q9HCC0 563 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 SLC22A11Q9NSA0 550 aa11.54□□□□□ -0.56
LIMK1-201ENST00000336180 J3QLW9 94 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF354AO60765 605 aaPredicted RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 HIST1H1CP16403 213 aaKnown RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 ZNF19P17023 458 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 PAICSP22234 425 aaKnown RBP11.53□□□□□ -0.56
LIMK1-201ENST00000336180 EVI2BP34910 448 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 WNT4P56705 351 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 DAB2P98082 770 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 SLC3A1Q07837 685 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 TAB1Q15750 504 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 RGS21Q2M5E4 152 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 CDONQ4KMG0 1287 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 TCTE1Q5JU00 501 aa11.53□□□□□ -0.56
LIMK1-201ENST00000336180 EXOSC6Q5RKV6 272 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms