RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 DKKL1Q9UK85 242 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 ZNF337Q9Y3M9 751 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 LYVE1Q9Y5Y7 322 aa14.93□□□□□ -0.02
SHOX-201ENST00000334060 OR2M5A3KFT3 312 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 H3BML4 177 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 CBR3O75828 277 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 BAG2O95816 211 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 UMPSP11172 480 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 CHN2P52757 468 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 ALG10BQ5I7T1 473 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 RAET1LQ5VY80 246 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 PIWIL3Q7Z3Z3 882 aaKnown RBP14.92□□□□□ -0.02
SHOX-201ENST00000334060 RANBP3LQ86VV4 465 aaPredicted RBP14.92□□□□□ -0.02
SHOX-201ENST00000334060 LSMEM1Q8N8F7 131 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 OR9Q2Q8NGE9 314 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 SMPDL3BQ92485 455 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 TM9SF4Q92544 642 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 ARL5BQ96KC2 179 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 GPA33Q99795 319 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 FUZQ9BT04 418 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 ADAM19Q9H013 955 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 SLC25A18Q9H1K4 315 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 SDHAF3Q9NRP4 125 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 SEC14L4Q9UDX3 406 aa14.92□□□□□ -0.02
SHOX-201ENST00000334060 BOKQ9UMX3 212 aaPredicted RBP14.92□□□□□ -0.02
SHOX-201ENST00000334060 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 SAC3D1A6NKF1 404 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 KDM4EB2RXH2 506 aaPredicted RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 NPIPA5E9PKD4 350 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 DPM1O60762 260 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 RASAL1O95294 804 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 PRB1P04280 392 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 CBLP22681 906 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ELAVL4P26378 380 aaKnown RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 SLC1A3P43003 542 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 CLDN15P56746 228 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 FOXK2Q01167 660 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 GXYLT1Q4G148 440 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 FGD3Q5JSP0 725 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 OR2T5Q6IEZ7 315 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ZNF554Q86TJ5 538 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 SIAH3Q8IW03 269 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 OR4C15Q8NGM1 316 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 OR2T29Q8NH02 315 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 OR14L1PQ8NHC6 308 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 MEPEQ9NQ76 525 aaPredicted RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 SPRR3Q9UBC9 169 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 PAIP2BQ9ULR5 123 aaKnown RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 NPIPA1Q9UND3 350 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 A0A087WUU8 490 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ZNF24P17028 368 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 RHCEP18577 417 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 PGCP20142 388 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 LIMS1P48059 325 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ZNF41P51814 821 aaPredicted RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 MLLT10P55197 1068 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 DSCR4P56555 118 aaPredicted RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 CLDN20P56880 219 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 DCTN2Q13561 401 aaKnown RBP14.91□□□□□ -0.02
SHOX-201ENST00000334060 TMEM44Q2T9K0 475 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 WBP2NLQ6ICG8 309 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 PODNL1Q6PEZ8 512 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 PIK3C3Q8NEB9 887 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ZNF559Q9BR84 538 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 ARMC7Q9H6L4 198 aa14.91□□□□□ -0.02
SHOX-201ENST00000334060 COL6A6A6NMZ7 2263 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 A0A1W2PNR3 127 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 TRAPPC13A5PLN9 417 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 CLOCKO15516 846 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 SFTPDP35247 375 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 HSPA13P48723 471 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 SUCLG1P53597 346 aaKnown RBP14.9□□□□□ -0.02
SHOX-201ENST00000334060 LRRC36Q1X8D7 754 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 LPCAT4Q643R3 524 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 FGD2Q7Z6J4 655 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 OFCC1Q8IZS5 231 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 ICA1LQ8NDH6 482 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 OIT3Q8WWZ8 545 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 SNRNP40Q96DI7 357 aaKnown RBP14.9□□□□□ -0.02
SHOX-201ENST00000334060 KTI12Q96EK9 354 aaPredicted RBP14.9□□□□□ -0.02
SHOX-201ENST00000334060 DHRS1Q96LJ7 313 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 FNDC11Q9BVV2 318 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 MRPS26Q9BYN8 205 aaKnown RBP14.9□□□□□ -0.02
SHOX-201ENST00000334060 KIAA1549Q9HCM3 1950 aa14.9□□□□□ -0.02
SHOX-201ENST00000334060 TMED7-TICAM2A0A0A6YYA0 188 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 CASQ2O14958 399 aaPredicted RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 DENRO43583 198 aaKnown RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 GP1BBP13224 206 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 SRD5A2P31213 254 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 GFRA1P56159 465 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 LTBQ06643 244 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ATP6AP1Q15904 470 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 UBQLNLQ8IYU4 475 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 LRRC17Q8N6Y2 441 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ZBTB8BQ8NAP8 495 aaPredicted RBP14.89□□□□□ -0.03
SHOX-201ENST00000334060 PNPLA2Q96AD5 504 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 PTGES2Q9H7Z7 377 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ZDHHC11Q9H8X9 412 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 TMEM27Q9HBJ8 222 aa14.89□□□□□ -0.03
SHOX-201ENST00000334060 ASF1BQ9NVP2 202 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms