RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 CEACAM8P31997 349 aaPredicted RBP14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 CARD18P57730 90 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 HSPB2Q16082 182 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 SYT14P1Q58G82 188 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 TRPM8Q7Z2W7 1104 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 RANBP3LQ86VV4 465 aaPredicted RBP14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 GCNT2Q8N0V5 402 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 RNF148Q8N7C7 305 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 OR52E4Q8NGH9 312 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 VANGL1Q8TAA9 524 aaPredicted RBP14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF559Q9BR84 538 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 PRR14Q9BWN1 585 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 PRRG4Q9BZD6 226 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 OR11A1Q9GZK7 315 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 ADAM19Q9H013 955 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 COQ10BQ9H8M1 238 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 NDE1Q9NXR1 346 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 TESQ9UGI8 421 aaKnown RBP14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 PRDM4Q9UKN5 801 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 PACSIN3Q9UKS6 424 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 MCTS1Q9ULC4 181 aaKnown RBP14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF175Q9Y473 711 aa14.26□□□□□ -0.13
CCDC28A-201ENST00000332797 FAM90A27PA6NNH2 459 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 B2RBV5 119 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CLDN14O95500 239 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CLDN1O95832 211 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 FESP07332 822 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 C8BP07358 591 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 TMIGD3P0DMS9 266 aaPredicted RBP14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CALB2P22676 271 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 HTR2AP28223 471 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 KDELR2P33947 212 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 NRF1Q16656 503 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CYBRD1Q53TN4 286 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 DEFB107AQ8IZN7 70 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 PROX1Q92786 737 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 C3orf49Q96BT1 292 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 INTS12Q96CB8 462 aaKnown RBP14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 DDIT4LQ96D03 193 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 DNAJA3Q96EY1 480 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 PSMG3-AS1Q96PY0 264 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 SRXN1Q9BYN0 137 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 TRIM2Q9C040 744 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 EVA1AQ9H8M9 152 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 TIGARQ9NQ88 270 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 BAG5Q9UL15 447 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 RCBTB2O95199 551 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 FCGR2AP12318 317 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 NCK1P16333 377 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 OR2A2Q6IF42 318 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 LIX1LQ8IVB5 337 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 OR6T1Q8NGN1 323 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CPNE4Q96A23 557 aaPredicted RBP14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 ZFP3Q96NJ6 502 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 CDRT15Q96T59 188 aa14.25□□□□□ -0.13
CCDC28A-201ENST00000332797 A0A1B0GWA3 101 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF208O43345 1280 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 AQP8O94778 261 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 T-ENOLP0DO92 83 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 TCN1P20061 433 aaPredicted RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 BMP5P22003 454 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 CTSSP25774 331 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 FKBP2P26885 142 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 DIO1P49895 249 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 AGFG1P52594 562 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 FOXF2Q12947 444 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 BNIP2Q12982 314 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 MYBPHQ13203 477 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 NPTX1Q15818 432 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF239Q16600 458 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 SAMD4BQ5PRF9 694 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 RINLQ6ZS11 566 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 ATG4DQ86TL0 474 aaPredicted RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 RBM45Q8IUH3 476 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 LSMEM1Q8N8F7 131 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 FAM156AQ8NDB6 213 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 RBM15BQ8NDT2 890 aaKnown RBP14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 OR4D11Q8NGI4 311 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 LILRB4Q8NHJ6 448 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 RNF217Q8TC41 542 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 ROBO4Q8WZ75 1007 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 FAM162AQ96A26 154 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 TPD52L3Q96J77 140 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 MCHR1Q99705 422 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 UCK2Q9BZX2 261 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 TMEM27Q9HBJ8 222 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 EGFL7Q9UHF1 273 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 SLC9A8Q9Y2E8 581 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 SH3GLB1Q9Y371 365 aa14.24□□□□□ -0.13
CCDC28A-201ENST00000332797 USP9YO00507 2555 aaPredicted RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 IGHV3-15A0A0B4J1V0 119 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ZC3H12DA2A288 527 aaKnown RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 NKX2-6A6NCS4 301 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ELOA3DA6NLF2 546 aaPredicted RBP14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 SULT2B1O00204 365 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 DVL2O14641 736 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 TPST2O60704 377 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 ZNF682O95780 498 aa14.23□□□□□ -0.13
CCDC28A-201ENST00000332797 GGT1P19440 569 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms