RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KLHL4Q9C0H6 718 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF385DQ9H6B1 395 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 BCL2L10Q9HD36 194 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF226Q9NYT6 803 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 VAPAQ9P0L0 249 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 EDARQ9UNE0 448 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 CORO2BQ9UQ03 480 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 HDGFL3Q9Y3E1 203 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 SPG11Q96JI7 2443 aa24.62■■□□□ 1.53
ATPAF1-201ENST00000329231 IGHV3-15A0A0B4J1V0 119 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 C5orf58C9J3I9 102 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 DNAJA1P31689 397 aaKnown RBP24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 CCKARP32238 428 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 BBS10Q8TAM1 723 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 NRGNQ92686 78 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 MAL2Q969L2 176 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 KLHL28Q9NXS3 571 aa24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 LEF1Q9UJU2 399 aaPredicted RBP24.61■■□□□ 1.53
ATPAF1-201ENST00000329231 TRBV5-3A0A0A0MS03 114 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 TMED7-TICAM2A0A0A6YYA0 188 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 SMAD9O15198 467 aaKnown RBP24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 CYTIPO60759 359 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 MAP2K6P52564 334 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 ARFIP2P53365 341 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 GCNT6Q5T4J0 391 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF550Q7Z398 422 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 ZHX1-C8orf76Q96EF9 292 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF317Q96PQ6 595 aaPredicted RBP24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 SPATA9Q9BWV2 254 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 BCO1Q9HAY6 547 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 NIPSNAP3AQ9UFN0 247 aaPredicted RBP24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 OSGIN1Q9UJX0 560 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 TMED7Q9Y3B3 224 aa24.6■■□□□ 1.53
ATPAF1-201ENST00000329231 ANKRD17O75179 2603 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 EVPLLA8MZ36 301 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 PMS2P2O95744 297 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 HRGP04196 525 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 FESP07332 822 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 GKN3PP0CG01 181 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 CD1EP15812 388 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 CCNA2P20248 432 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 TACR3P29371 465 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 RASGEF1BQ0VAM2 473 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF311Q5JNZ3 666 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 NUFIP2Q7Z417 695 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 MTDHQ86UE4 582 aaKnown RBP24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 DDIT4LQ96D03 193 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 ARL5BQ96KC2 179 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 PSD2Q9BQI7 771 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 NDUFAF1Q9Y375 327 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 CCDC168Q8NDH2 2452 aa24.59■■□□□ 1.53
ATPAF1-201ENST00000329231 ANGPT2O15123 496 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 ZNF208O43345 1280 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 PGM3O95394 542 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 ARAFP10398 606 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 ETS2P15036 469 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 PPP3CBP16298 524 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 COPZ1P61923 177 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 TFAP2EQ6VUC0 442 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 STAC2Q6ZMT1 411 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 CLIP4Q8N3C7 705 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 TSPEARQ8WU66 669 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 NINJ1Q92982 152 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 OR11A1Q9GZK7 315 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 ADAM19Q9H013 955 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 KLHL14Q9P2G3 628 aa24.58■■□□□ 1.53
ATPAF1-201ENST00000329231 DNPH1O43598 174 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 GPX2P18283 190 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 ACAA2P42765 397 aaKnown RBP24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 POU4F3Q15319 338 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 WBP2NLQ6ICG8 309 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 DLEU7Q6UYE1 221 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 ST6GALNAC2Q9UJ37 374 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 ING1Q9UK53 422 aaPredicted RBP24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 TRAPPC4Q9Y296 219 aa24.57■■□□□ 1.52
ATPAF1-201ENST00000329231 TMEM72A0PK05 275 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 ZNF724A8MTY0 619 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 CRYGSP22914 178 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 CDK6Q00534 326 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 SF3A3Q12874 501 aaKnown RBP eCLIP24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 ANKRD34AQ69YU3 496 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 REEP3Q6NUK4 255 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 DPP10Q8N608 796 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 NFKBIDQ8NI38 313 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 SLC35B4Q969S0 331 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 LIME1Q9H400 295 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 IKZF5Q9H5V7 419 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 TMEM38AQ9H6F2 299 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 MRGBPQ9NV56 204 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 TMEM181Q9P2C4 612 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 GPR52Q9Y2T5 361 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 CHST2Q9Y4C5 530 aa24.56■■□□□ 1.52
ATPAF1-201ENST00000329231 OTOGQ6ZRI0 2925 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 KLK2P20151 261 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 PSMB1P20618 241 aaKnown RBP24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 CXCR1P25024 350 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 OR2B6P58173 313 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 PDK3Q15120 406 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 RUNDC3AQ59EK9 446 aa24.55■■□□□ 1.52
ATPAF1-201ENST00000329231 DHDDSQ86SQ9 333 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms