RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GJB3O75712 270 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PPIBP23284 216 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CD52P31358 61 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PCGF2P35227 344 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CDKN1CP49918 316 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 MMP15P51511 669 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 DLX5P56178 289 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 MRPS11P82912 194 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 SRSF11Q05519 484 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TRA2AQ13595 282 aaKnown RBP eCLIP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ARHGEF7Q14155 803 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 BEX5Q5H9J7 111 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ATPAF1Q5TC12 328 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 OR6V1Q8N148 313 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 IQCF1Q8N6M8 205 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PAQR8Q8TEZ7 354 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CMTM7Q96FZ5 175 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CAMK1GQ96NX5 476 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM208Q9BTX3 173 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TRMT61BQ9BVS5 477 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CHST8Q9H2A9 424 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 SFXN1Q9H9B4 322 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 HRASLSQ9HDD0 168 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ACER3Q9NUN7 267 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 FAM120CQ9NX05 1096 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 RCC2Q9P258 522 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TESQ9UGI8 421 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PADI3Q9ULW8 664 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PLXNA3P51805 1871 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 DRGXA6NNA5 263 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 LRRN3E7EW58 273 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 TLR5O60602 858 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 MOSPD3O75425 235 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 HLA-DPB1P04440 258 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 OR12D1P0DN82 309 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 SDC1P18827 310 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PRPS1L1P21108 318 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 XPAP23025 273 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CST5P28325 142 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ART1P52961 327 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 DYRK1AQ13627 763 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 ELAVL1Q15717 326 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 SCGB2B2Q4G0G5 96 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 GGTA1PQ4G0N0 100 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 FNDC3BQ53EP0 1204 aaKnown RBP10.99□□□□□ -0.65
SHMT2-201ENST00000328923 FAAP20Q6NZ36 180 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 C6orf120Q7Z4R8 191 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 LRRTM4Q86VH4 590 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 NPAS3Q8IXF0 933 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 R3HDM4Q96D70 268 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 PANX1Q96RD7 426 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 NRIP2Q9BQI9 281 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 NRSN2Q9GZP1 204 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 LRRN3Q9H3W5 708 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 SLC35A3Q9Y2D2 325 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 CEP290O15078 2479 aa10.99□□□□□ -0.65
SHMT2-201ENST00000328923 A6NCN8 305 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 H3BN98 237 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CYTIPO60759 359 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CLDN9O95484 217 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 IL33O95760 270 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 EPB42P16452 691 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 OMPP47874 163 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 MTNR1BP49286 362 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ODF4Q2M2E3 257 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ACSM5Q6NUN0 579 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 JMJD6Q6NYC1 403 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 VITQ6UXI7 678 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF783Q6ZMS7 281 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 GPR137CQ8N3F9 429 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CSGALNACT1Q8TDX6 532 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 NECAB3Q96P71 396 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TSSK3Q96PN8 268 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 COPS8Q99627 209 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 NCOR1P1Q9H4R4 102 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 RDH14Q9HBH5 336 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 RPS10P5Q9NQ39 176 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 THSD1Q9NS62 852 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ZSCAN32Q9NX65 697 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TAS2R5Q9NYW4 299 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TVP23BQ9NYZ1 205 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 GDF2Q9UK05 429 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TMEM184BQ9Y519 407 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 SERTM1A2A2V5 107 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 TRAPPC13A5PLN9 417 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CASTOR2A6NHX0 329 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 LOC730098B7Z3J9 87 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 MKRN2OSH3BPM6 223 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 GCM2O75603 506 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 PMELP40967 661 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 EPHB3P54753 998 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CARD18P57730 90 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ZNHIT3Q15649 155 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 XKR6Q5GH73 641 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 NSUN5P2Q63ZY6 315 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 CXorf57Q6NSI4 855 aaKnown RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 ZNF621Q6ZSS3 439 aa10.98□□□□□ -0.65
SHMT2-201ENST00000328923 PCSK9Q8NBP7 692 aaKnown RBP10.98□□□□□ -0.65
SHMT2-201ENST00000328923 NUBPLQ8TB37 319 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms