RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 LRRC17Q8N6Y2 441 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 NRBF2Q96F24 287 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 ZNF597Q96LX8 424 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 RNF32Q9H0A6 362 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 GABARAPL1Q9H0R8 117 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 IL20RAQ9UHF4 553 aa13.83□□□□□ -0.19
PRPF3-201ENST00000324862 NCKAP5O14513 1909 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 TMED7-TICAM2A0A0A6YYA0 188 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 H3BML4 177 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 TRAPPC6AO75865 159 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 IFI30P13284 250 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 CD46P15529 392 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 IGFBP5P24593 272 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 GSSP48637 474 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 MEOX1P50221 254 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 GXYLT1Q4G148 440 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 RNFT1Q5M7Z0 435 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 C6orf52Q5T4I8 152 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 RRM2BQ7LG56 351 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 GRINAQ7Z429 371 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 KTI12Q96EK9 354 aaPredicted RBP13.83□□□□□ -0.2
PRPF3-201ENST00000324862 RBM4BQ9BQ04 359 aaKnown RBP13.83□□□□□ -0.2
PRPF3-201ENST00000324862 FAM173AQ9BQD7 235 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 RBM4Q9BWF3 364 aaKnown RBP13.83□□□□□ -0.2
PRPF3-201ENST00000324862 TTTY12Q9BZ98 90 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 RASSF4Q9H2L5 321 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 UBQLN3Q9H347 655 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 PTGES2Q9H7Z7 377 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 ZFP64Q9NPA5 681 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 SELENONQ9NZV5 590 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 TMED7Q9Y3B3 224 aa13.83□□□□□ -0.2
PRPF3-201ENST00000324862 ACACBO00763 2458 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 SUSD5O60279 629 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 FAM87AP0C7U9 286 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 THRBP10828 461 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 MSX1P28360 303 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 SHC1P29353 583 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 ALDH6A1Q02252 535 aaKnown RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 KLHL17Q6TDP4 642 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 ARL5BQ96KC2 179 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 C5orf34Q96MH7 638 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 POLR2J2Q9GZM3 115 aaKnown RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 POLR2J3Q9H1A7 115 aaKnown RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 ZNF71Q9NQZ8 489 aaPredicted RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 KRT84Q9NSB2 600 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 DKKL1Q9UK85 242 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 CBR3O75828 277 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 HK1P19367 917 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 CXCR1P25024 350 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 GDF1P27539 372 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 MAGEA5P43359 124 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 SUMO3P55854 103 aaPredicted RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 WIPI1Q5MNZ9 446 aaPredicted RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 RAET1LQ5VY80 246 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 TTC33Q6PID6 262 aaPredicted RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 SCMH1Q96GD3 660 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 TSPAN10Q9H1Z9 355 aaPredicted RBP13.82□□□□□ -0.2
PRPF3-201ENST00000324862 TOR3AQ9H497 397 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 ANKRD19PQ9H560 264 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 TNFRSF10DQ9UBN6 386 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 C15orf41Q9Y2V0 281 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 MED31Q9Y3C7 131 aa13.82□□□□□ -0.2
PRPF3-201ENST00000324862 ENO4A6NNW6 628 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 POLR2HP52434 150 aaKnown RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 LTBQ06643 244 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 C1orf94Q6P1W5 598 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 FAM83FQ8NEG4 500 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 ST8SIA1Q92185 356 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 NR4A3Q92570 626 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 MPP4Q96JB8 637 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 MOGAT1Q96PD6 335 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 MBOAT4Q96T53 435 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 ZNF184Q99676 751 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 RIBC2Q9H4K1 309 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 EGLN3Q9H6Z9 239 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 ZNF703Q9H7S9 590 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 SMPD3Q9NY59 655 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 SEC14L4Q9UDX3 406 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 TP53TG5Q9Y2B4 290 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 H0YC42 278 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 CH25HO95992 272 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 GNAO1P09471 354 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 TPD52P55327 224 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 DSCR4P56555 118 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 NHSL2Q5HYW2 709 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 SWT1Q5T5J6 900 aaKnown RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 TMEM251Q8N6I4 163 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 PIGXQ8TBF5 258 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 TMEM234Q8WY98 164 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 BPIFA2Q96DR5 249 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 USE1Q9NZ43 259 aa13.81□□□□□ -0.2
PRPF3-201ENST00000324862 KLF13Q9Y2Y9 288 aaPredicted RBP13.81□□□□□ -0.2
PRPF3-201ENST00000324862 OR2M5A3KFT3 312 aa13.8□□□□□ -0.2
PRPF3-201ENST00000324862 ZNHIT1O43257 154 aa13.8□□□□□ -0.2
PRPF3-201ENST00000324862 TP53P04637 393 aaPredicted RBP13.8□□□□□ -0.2
PRPF3-201ENST00000324862 PNMTP11086 282 aa13.8□□□□□ -0.2
PRPF3-201ENST00000324862 SFTPDP35247 375 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms