RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 ESCO2Q56NI9 601 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 LETMD1Q6P1Q0 360 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 HIST2H3AQ71DI3 136 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 BPHLQ86WA6 291 aaPredicted RBP7.42□□□□□ -1.22
CIITA-201ENST00000324288 HORMAD2Q8N7B1 307 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 PKMYT1Q99640 499 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 SEC22CQ9BRL7 303 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 THSD1Q9NS62 852 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 RBPJLQ9UBG7 517 aa7.42□□□□□ -1.22
CIITA-201ENST00000324288 DPM1O60762 260 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CLEC2LP0C7M8 214 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 C7P10643 843 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 APCDD1Q8J025 514 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SELPLGQ14242 412 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TCTE1Q5JU00 501 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 STEAP4Q687X5 459 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 OR8U1Q8NH10 309 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 IMP4Q96G21 291 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLC23A2Q9UGH3 650 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 C2orf72A6NCS6 295 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ZNF43P17038 809 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PGCP20142 388 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PCGF2P35227 344 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 EEF1A1P68104 462 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 PLA2G7Q13093 441 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ADIRFQ15847 76 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 HAGHQ16775 308 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 FCRLAQ7L513 359 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLC43A2Q8N370 569 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 OR13C2Q8NGS9 318 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 GATA6Q92908 595 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TBC1D20Q96BZ9 403 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 MAF1Q9H063 256 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 FBXO8Q9NRD0 319 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 DUOX1Q9NRD9 1551 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CDC14CA4D256 554 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 GYPBP06028 91 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 THBS1P07996 1170 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CTRB1P17538 263 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 RAP2BP61225 183 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ATPAF1Q5TC12 328 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 CTRB2Q6GPI1 263 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 B3GLCTQ6Y288 498 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 MRPL21Q7Z2W9 205 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 SPTSSAQ969W0 71 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ZNF689Q96CS4 500 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 WWTR1Q9GZV5 400 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLCO3A1Q9UIG8 710 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 HEPACAM2A8MVW5 462 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 RBPMSQ93062 196 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 ACTRT3Q9BYD9 372 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 C11orf54Q9H0W9 315 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 DOCK3Q8IZD9 2030 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CBX7O95931 251 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CHRM4P08173 479 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 OSMP13725 252 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 FDXRP22570 491 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PXNP49023 591 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 CLDN8P56748 225 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 EXOSC7Q15024 291 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 PODNL1Q6PEZ8 512 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 MAMDC2Q7Z304 686 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 KLHDC8AQ8IYD2 350 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TFAP2CQ92754 450 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TEPSINQ96N21 525 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TXNRD2Q9NNW7 524 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 FAM183AA6NL82 134 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 G3V2L1 256 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ITGAMP11215 1152 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TSFMP43897 325 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 ACSM3Q53FZ2 586 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 RPL13AP3Q6NVV1 102 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ZNF574Q6ZN55 896 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 GGHQ92820 318 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ANKRD60Q9BZ19 345 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ERVMER34-1Q9H9K5 563 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ELOVL3Q9HB03 270 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 MTCH1Q9NZJ7 389 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CREBBPQ92793 2442 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TMEM131LA2VDJ0 1609 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 A0A0U1RQF3 1178 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PRAMEF27A3QJZ7 478 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SNNO75324 88 aaPredicted RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 MBP02144 154 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 WNT4P56705 351 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 TAGLNQ01995 201 aaKnown RBP7.41□□□□□ -1.22
CIITA-201ENST00000324288 HMGN3Q15651 99 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 PRAMEF9Q5VWM5 478 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 ZDHHC14Q8IZN3 488 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SPIN2AQ99865 258 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SPIN2BQ9BPZ2 258 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 FAM173AQ9BQD7 235 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SIX4Q9UIU6 781 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 LIPT1Q9Y234 373 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 HRH3Q9Y5N1 445 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 RGPD2P0DJD1 1756 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 CA12O43570 354 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 SLC10A1Q14973 349 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 DUSP6Q16828 381 aa7.41□□□□□ -1.22
CIITA-201ENST00000324288 UPP1Q16831 310 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms