RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 ORAI1Q96D31 301 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 MICU1Q9BPX6 476 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 ZFYVE21Q9BQ24 234 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 POLDIP3Q9BY77 421 aaKnown RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 ZNF768Q9H5H4 540 aaKnown RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 POLMQ9NP87 494 aaPredicted RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 FANCFQ9NPI8 374 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 SAGE1Q9NXZ1 904 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 ERVK-19Q9WJR5 959 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 RD3LP0DJH9 198 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 TRIM23P36406 574 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 RPS27P42677 84 aaKnown RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 KIAA1211LQ6NV74 962 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 FAHD1Q6P587 224 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 ANKRD33Q7Z3H0 272 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 ZNF547Q8IVP9 402 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 TMEM239Q8WW34 195 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 GPER1Q99527 375 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 MS4A7Q9GZW8 240 aaPredicted RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 H0YGG7 62 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 SCDO00767 359 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 CLEC3AO75596 197 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 HLA-DMAP28067 261 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 KCNJ5P48544 419 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 ARF3P61204 181 aaPredicted RBP14.19□□□□□ -0.14
VARS2-201ENST00000321897 TMEM35AQ53FP2 167 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 BBS1Q8NFJ9 593 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 OR5W2Q8NH69 310 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 THAP6Q8TBB0 222 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 PRRC1Q96M27 445 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 HHIPQ96QV1 700 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 OR2M2Q96R28 347 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 CA14Q9ULX7 337 aa14.19□□□□□ -0.14
VARS2-201ENST00000321897 C2orf74A8MZ97 194 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 ITGA10O75578 1167 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 F13BP05160 661 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 HBQ1P09105 142 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 AQP2P41181 271 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 XCR1P46094 333 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 IRF3Q14653 427 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 USF2Q15853 346 aaPredicted RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 SYT14P1Q58G82 188 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 FAM160A2Q8N612 972 aaPredicted RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 NANOGP1Q8N7R0 232 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 NSMAFQ92636 917 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 C6orf106Q9H6K1 298 aaPredicted RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 GSKIPQ9P0R6 139 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 SCP2D1Q9UJQ7 156 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 GPR179Q6PRD1 2367 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 PARP14Q460N5 1801 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 LRIT2A6NDA9 550 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 CXCL10P02778 98 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 CHRM4P08173 479 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 UBL4AP11441 157 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 GABRA5P31644 462 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 OR1D4P47884 311 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 ZFP36L2P47974 494 aaKnown RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 OR10A3P58181 314 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 SORDQ00796 357 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 RAB40BQ12829 278 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 HTR4Q13639 388 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 AANATQ16613 207 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 DEFB133Q30KQ1 61 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 TEX261Q6UWH6 196 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 LRRC28Q86X40 367 aaPredicted RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 ADGRF3Q8IZF5 1079 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 TMIEQ8NEW7 156 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 OR10H5Q8NGA6 315 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 OR52R1Q8NGF1 315 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 OR1E3Q8WZA6 343 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 BPIFA2Q96DR5 249 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 NEURL3Q96EH8 262 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 C4orf36Q96KX1 117 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 ASB16Q96NS5 453 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 NRSN2Q9GZP1 204 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 MTHFD2LQ9H903 347 aaPredicted RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 PLCXD1Q9NUJ7 323 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 U3KQ87 197 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 LAMA2P24043 3122 aaKnown RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 PLXNB2O15031 1838 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 SPARCP09486 303 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 DGCR2P98153 550 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 ZNF33BQ06732 778 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 CALHM3Q86XJ0 350 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 KIAA1958Q8N8K9 716 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 CNOT9Q92600 299 aaKnown RBP14.18□□□□□ -0.14
VARS2-201ENST00000321897 CDCA4Q9BXL8 241 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 PBX4Q9BYU1 374 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 BARHL1Q9BZE3 327 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 ACTR6Q9GZN1 396 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 NOX3Q9HBY0 568 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 SEMA4GQ9NTN9 838 aa14.18□□□□□ -0.14
VARS2-201ENST00000321897 PRH1P02810 166 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 ACP2P11117 423 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 ZNF14P17017 642 aaPredicted RBP14.17□□□□□ -0.14
VARS2-201ENST00000321897 GDNFP39905 211 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 TDGQ13569 410 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 NKPD1Q17RQ9 610 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 ARHGAP40Q5TG30 622 aa14.17□□□□□ -0.14
VARS2-201ENST00000321897 SLC22A10Q63ZE4 541 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms