RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 SHARPINQ9H0F6 387 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 CACNA1CQ13936 2221 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 DMDP11532 3685 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 CDC42EP2O14613 210 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 NDUFA2O43678 99 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 RDH16O75452 317 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SEMA4FO95754 770 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 POU3F2P20265 443 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 IGFBP4P22692 258 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 RAB14P61106 215 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 GRM7Q14831 915 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 TRAM2Q15035 370 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 C1orf94Q6P1W5 598 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 PARGQ86W56 976 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 STPG2Q8N412 459 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 COX18Q8N8Q8 333 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC41A3Q96GZ6 507 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF578Q96N58 590 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 GPR174Q9BXC1 333 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 DPH1Q9BZG8 443 aa14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 FGF20Q9NP95 211 aaPredicted RBP14.38□□□□□ -0.11
SHROOM1-201ENST00000319854 HPXP02790 462 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CTSEP14091 401 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 TEAD1P28347 426 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 MTNR1AP48039 350 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ST3GAL3Q11203 375 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 GDF7Q7Z4P5 450 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ABCA7Q8IZY2 2146 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 OR9A4Q8NGU2 314 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 OR10Z1Q8NGY1 313 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 PIGXQ8TBF5 258 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 SFXN5Q8TD22 340 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ST8SIA2Q92186 375 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 HGDQ93099 445 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC22A18Q96BI1 424 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CXorf58Q96LI9 332 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 SAMD8Q96LT4 415 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ZFYVE21Q9BQ24 234 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CYSLTR2Q9NS75 346 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 SDHAF2Q9NX18 166 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 LYARQ9NX58 379 aaKnown RBP14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 PHF11Q9UIL8 331 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 hCG_1807616A0A1W2PRN6 198 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CD3GP09693 182 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CPMP14384 443 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 GABRA3P34903 492 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 CDK5Q00535 292 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 EOGTQ5NDL2 527 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 FAM27D1Q5T7N8 215 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 MTFR2Q6P444 385 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF836Q6ZNA1 936 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 HDDC2Q7Z4H3 204 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 MS4A4EQ96PG1 132 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 TTTY10Q9BZA0 68 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 FAM60AQ9NP50 221 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 ZNF443Q9Y2A4 671 aaPredicted RBP14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 MAB21L2Q9Y586 359 aa14.37□□□□□ -0.11
SHROOM1-201ENST00000319854 GXYLT2A0PJZ3 443 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 CT62P0C5K7 136 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 NDUFS1P28331 727 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 AKT2P31751 481 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC1A3P43003 542 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 ZAR1Q86SH2 424 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 FTMTQ8N4E7 242 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SAMD12Q8N8I0 201 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 OR2T35Q8NGX2 323 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 OR2T4Q8NH00 348 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 PFN4Q8NHR9 129 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 FLVCR1-AS1Q8TAF5 88 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 DIO2Q92813 273 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 RELTQ969Z4 430 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 HCN3Q9P1Z3 774 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 MEIKINA0A087WXM9 373 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 A0A1W2PRG6 482 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 IFNA16P05015 189 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 MAOBP27338 520 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 OR10A3P58181 314 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 RAB40BQ12829 278 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 BAMBIQ13145 260 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 FZD5Q13467 585 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 GSG1Q2KHT4 349 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 OR5M3Q8NGP4 307 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 OR4Q3Q8NH05 313 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 ENKD1Q9H0I2 346 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 LMAN2LQ9H0V9 348 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 CLEC4AQ9UMR7 237 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC22A23A1A5C7 686 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 POM121CA8CG34 1229 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 CASC3O15234 703 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC19A2O60779 497 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 UBXN7O94888 489 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 ANKRD34CP0C6C1 535 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 ZP3P21754 424 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 CDH11P55287 796 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 MAT1AQ00266 395 aaKnown RBP14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC25A30Q5SVS4 291 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SHEQ5VZ18 495 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 DGAT2L6Q6ZPD8 337 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 CSNK1A1LQ8N752 337 aa14.36□□□□□ -0.11
SHROOM1-201ENST00000319854 SLC38A2Q96QD8 506 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms