RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ATP5A1P25705 553 aaKnown RBP4.43□□□□□ -1.7
PTPN13-201ENST00000316707 GPR4P46093 362 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 DIO1P49895 249 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 E2F1Q01094 437 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 LINC00303Q3SY05 128 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 C17orf107Q6ZR85 190 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR2A12Q8NGT7 310 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 OR2L2Q8NH16 312 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TRIM2Q9C040 744 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 POLE3Q9NRF9 147 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 RNF181Q9P0P0 153 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 NTMQ9P121 344 aa4.43□□□□□ -1.7
PTPN13-201ENST00000316707 TRBV2A0A0J9YWF9 115 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 A0A1B0GVC2 190 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MANSC4A6NHS7 340 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 A6NIN4 97 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 HSPB2A8KAH6 182 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LCMT2O60294 686 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 RDH16O75452 317 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GPR1P46091 355 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 VASPP50552 380 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 OR12D2P58182 307 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ST8SIA6P61647 398 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SNTB1Q13884 538 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CBFBQ13951 182 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 HSPB2Q16082 182 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ARSIQ5FYB1 569 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 NKAPLQ5M9Q1 402 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TXNDC8Q6A555 127 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 Q6ZVU0 165 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BBS1Q8NFJ9 593 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CCNL2Q96S94 520 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 C12orf57Q99622 126 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 KLHL31Q9H511 634 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 STARD7Q9NQZ5 370 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 EPHA6Q9UF33 1036 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF281Q9Y2X9 895 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MYADML2A6NDP7 307 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM202A6NGA9 273 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 H3BUI4 141 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 OR1F1O43749 312 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 NDUFB2O95178 105 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 EPPINO95925 133 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PLATP00750 562 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 IFI6P09912 130 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GLULP15104 373 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF10P21506 573 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MPGP29372 298 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GPR68Q15743 365 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 NDUFAF7Q7L592 441 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PAQR7Q86WK9 346 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 IFNL1Q8IU54 200 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ARMC10Q8N2F6 343 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 KCNRGQ8N5I3 272 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF433Q8N7K0 673 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 C17orf47Q8NEP4 570 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM185AQ8NFB2 350 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ARL11Q969Q4 196 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 WBP2Q969T9 261 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BPIFA2Q96DR5 249 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 MS4A4EQ96PG1 132 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CLEC4AQ9UMR7 237 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ZNF780BQ9Y6R6 833 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 A0A0A6YYH2 397 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 A6NJ64 397 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AGRPO00253 132 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BHLHE40O14503 412 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SOD2P04179 222 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 GKN3PP0CG01 181 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AKAIN1P0CW23 69 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SELPP16109 830 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ACADLP28330 430 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TLX1P31314 330 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PRSS3P35030 304 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 P2RX1P51575 399 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TAS2R20P59543 309 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 STXBP1P61764 594 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AMZ1Q400G9 498 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 RNASE12Q5GAN4 147 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AVPI1Q5T686 147 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PWWP2BQ6NUJ5 590 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SLC48A1Q6P1K1 146 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BEST3Q8N1M1 668 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 BCL7CQ8WUZ0 217 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 KISS1RQ969F8 398 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 IGSF21Q96ID5 467 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 LGR4Q9BXB1 951 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 AUNIPQ9H7T9 357 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ISG20L2Q9H9L3 353 aaKnown RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM218A2RU14 115 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 TMEM200CA6NKL6 621 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 FAM183AA6NL82 134 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 P2RX6O15547 441 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 CDC40O60508 579 aaKnown RBP eCLIP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 S100A6P06703 90 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 SYPP08247 313 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PBLDP30039 288 aaPredicted RBP4.42□□□□□ -1.7
PTPN13-201ENST00000316707 PTH2RP49190 550 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms