RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 ANKRD34AQ69YU3 496 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 RETREG3Q86VR2 466 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 OR52P1PQ8NH57 321 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 DYDC1Q8WWB3 177 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 FOXC2Q99958 501 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 TIGARQ9NQ88 270 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 ZNF443Q9Y2A4 671 aaPredicted RBP12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 PLEKHA6Q9Y2H5 1048 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 AKAP6Q13023 2319 aa12.96□□□□□ -0.33
PPP1CA-201ENST00000312989 IGKV3D-15A0A087WSY6 115 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 A0A1W2PP18 115 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 CFAP73A6NFT4 308 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 PRKD3O94806 890 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 ANP32DO95626 131 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 PMS2P2O95744 297 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 YES1P07947 543 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 PABPC4LP0CB38 370 aaKnown RBP12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 GKN3PP0CG01 181 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 ARAFP10398 606 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 IL7RP16871 459 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 TACR3P29371 465 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 SLC1A3P43003 542 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 FADDQ13158 208 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 ADRM1Q16186 407 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 LIN52Q52LA3 116 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 PRAMEF8Q5VWM4 474 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 PRAMEF7Q5VXH5 474 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 KRTAP1-3Q8IUG1 177 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 SLC43A2Q8N370 569 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF563Q8TA94 476 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 MBD6Q96DN6 1003 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 DNAJA3Q96EY1 480 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 CPPED1Q9BRF8 314 aaPredicted RBP12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 OR10A4Q9H209 315 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 SERINC1Q9NRX5 453 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 NDRG3Q9UGV2 375 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 ABCA4P78363 2273 aa12.95□□□□□ -0.34
PPP1CA-201ENST00000312989 TMED7-TICAM2A0A0A6YYA0 188 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 A0A0G2JPF8 293 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF724A8MTY0 619 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 HNRNPCL2B2RXH8 293 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 HNRNPCL3B7ZW38 293 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 HNRNPCL1O60812 293 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 PGM3O95394 542 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 HNRNPCL4P0DMR1 293 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 GPX2P18283 190 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 CD53P19397 219 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 OR3A2P47893 321 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 KCNJ5P48544 419 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 ART1P52961 327 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 IRX1P78414 480 aaPredicted RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 PDK3Q15120 406 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 TSC22D1Q15714 1073 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 AGKQ53H12 422 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 GTF2IRD2BQ6EKJ0 949 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 BEND4Q6ZU67 534 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 SERPINA11Q86U17 422 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 MTDHQ86UE4 582 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 GTF2IRD2Q86UP8 949 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 PEX5LQ8IYB4 626 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 GOLGA6L1Q8N7Z2 621 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 IGFBPL1Q8WX77 278 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 MED18Q9BUE0 208 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 SPATA9Q9BWV2 254 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 KLHL4Q9C0H6 718 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 NPHS2Q9NP85 383 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 CALML5Q9NZT1 146 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 KLHL9Q9P2J3 617 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 PRSS50Q9UI38 385 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 TMED7Q9Y3B3 224 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 HDGFL3Q9Y3E1 203 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM229AB2RXF0 380 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 SULT2B1O00204 365 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 ZNF208O43345 1280 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 DNPH1O43598 174 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 FZD7O75084 574 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 NPIPB7O75200 414 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 COX5AP20674 150 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 CLK1P49759 484 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 P2RY4P51582 365 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 POLR2HP52434 150 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 SLC16A1P53985 500 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 RASGEF1BQ0VAM2 473 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 SELPLGQ14242 412 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM201Q5SNT2 666 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 CXorf67Q86X51 503 aaPredicted RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 PTOV1Q86YD1 416 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 DPP10Q8N608 796 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 WFDC6Q9BQY6 131 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 TMEM204Q9BSN7 226 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 ACTR6Q9GZN1 396 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 THUMPD1Q9NXG2 353 aaKnown RBP12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 GPR52Q9Y2T5 361 aa12.94□□□□□ -0.34
PPP1CA-201ENST00000312989 MPDZO75970 2070 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 FRS3O43559 492 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 RAF1P04049 648 aa12.93□□□□□ -0.34
PPP1CA-201ENST00000312989 CCNA2P20248 432 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms