RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 TMEM205Q6UW68 189 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 CPEB2Q7Z5Q1 589 aaKnown RBP19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ADCK1Q86TW2 530 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 OR4F15Q8NGB8 312 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 NACC2Q96BF6 587 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF524Q96C55 264 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 VMP1Q96GC9 406 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 LPAR4Q99677 370 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 KLHDC3Q9BQ90 382 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 CHCHD6Q9BRQ6 235 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 TMEM43Q9BTV4 400 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 DCSTAMPQ9H295 470 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 MED20Q9H944 212 aa19.43■□□□□ 0.7
ATG4D-201ENST00000309469 LOC100506127A0A0U1RQW1 187 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 TMEM129A0AVI4 362 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 FADS1O60427 444 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 OR7A10O76100 309 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 NDUFB2O95178 105 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 HK1P19367 917 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 AVPR2P30518 371 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 SOX3P41225 446 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 TIMM50Q3ZCQ8 353 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 FCRLBQ6BAA4 426 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 C16orf47Q6ZP98 133 aaPredicted RBP19.42■□□□□ 0.7
ATG4D-201ENST00000309469 MEPCEQ7L2J0 689 aaKnown RBP19.42■□□□□ 0.7
ATG4D-201ENST00000309469 NUBPLQ8TB37 319 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 LOXL4Q96JB6 756 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 OSGIN1Q9UJX0 560 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF337Q9Y3M9 751 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 NPFFR2Q9Y5X5 522 aa19.42■□□□□ 0.7
ATG4D-201ENST00000309469 RIIAD1A6NNX1 92 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 PRR23D1E9PI22 279 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-201ENST00000309469 IGF2P01344 180 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 LIMS3P0CW19 117 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 LIMS4P0CW20 117 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 PRR23D2P0DMB1 279 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-201ENST00000309469 WNT4P56705 351 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 TUBA1BP68363 451 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 SOWAHCQ53LP3 525 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-201ENST00000309469 TUBA1AQ71U36 451 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 RHBDD1Q8TEB9 315 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 PTP4A1Q93096 173 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 HCAR1Q9BXC0 346 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ADAM19Q9H013 955 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 C12orf10Q9HB07 376 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 FBXO8Q9NRD0 319 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 TRBV11-1A0A0K0K1C0 115 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ANKRD33BA6NCL7 494 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 CYC1P08574 325 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ITPKBP27987 946 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 TACR3P29371 465 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 NOS3P29474 1203 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 EVI2BP34910 448 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ATP6V1E1P36543 226 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 KHDRBS1Q07666 443 aaKnown RBP eCLIP19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ITGADQ13349 1161 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 ARHGAP11AQ6P4F7 1023 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 LINC00299Q6ZSB3 139 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 USP43Q70EL4 1123 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 SLC15A4Q8N697 577 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 SLC37A3Q8NCC5 494 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 OR5M3Q8NGP4 307 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 CENPOQ9BU64 300 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 WDR54Q9H977 334 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 C19orf25Q9UFG5 118 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-201ENST00000309469 PCDHGA5Q9Y5G8 931 aa19.41■□□□□ 0.7
ATG4D-201ENST00000309469 MUC3AQ02505 3323 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 C17orf51A8MQB3 221 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 GMFGO60234 142 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 KLK3P07288 261 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-201ENST00000309469 ZNF3P17036 446 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 OPRL1P41146 370 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 EFR3AQ14156 821 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 OR2G6Q5TZ20 316 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 OR5W2Q8NH69 310 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 THAP3Q8WTV1 239 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-201ENST00000309469 C8orf44Q96CB5 159 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 ERMAPQ96PL5 475 aaPredicted RBP19.4■□□□□ 0.7
ATG4D-201ENST00000309469 DEPDC7Q96QD5 511 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 TNFRSF10DQ9UBN6 386 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 PMF1-BGLAPU3KQ54 211 aa19.4■□□□□ 0.7
ATG4D-201ENST00000309469 SCO2O43819 266 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 IFNGP01579 166 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 IGHA1P01876 353 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 CRMP1Q14194 572 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 FAM199XQ6PEV8 388 aaPredicted RBP19.39■□□□□ 0.7
ATG4D-201ENST00000309469 LHFPL3Q86UP9 236 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 PSD4Q8NDX1 1056 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 KBTBD8Q8NFY9 601 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 OR8K3Q8NH51 312 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 RNF167Q9H6Y7 350 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 CHRNA9Q9UGM1 479 aa19.39■□□□□ 0.7
ATG4D-201ENST00000309469 GPN3Q9UHW5 284 aaPredicted RBP19.39■□□□□ 0.7
ATG4D-201ENST00000309469 NXT1Q9UKK6 140 aaKnown RBP19.39■□□□□ 0.7
ATG4D-201ENST00000309469 TMEM200CA6NKL6 621 aa19.39■□□□□ 0.69
ATG4D-201ENST00000309469 J3QRE1 110 aa19.39■□□□□ 0.69
ATG4D-201ENST00000309469 FLRT2O43155 660 aa19.39■□□□□ 0.69
ATG4D-201ENST00000309469 ZNF354AO60765 605 aaPredicted RBP19.39■□□□□ 0.69
ATG4D-201ENST00000309469 PGCP20142 388 aa19.39■□□□□ 0.69
ATG4D-201ENST00000309469 PAICSP22234 425 aaKnown RBP19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms